Gene
RNA
| Item | Value |
|---|---|
| gene id | G1229812 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 24025596 ~ 24025873 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Putative transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1403476 | True | 278 | lncRNA | 0.52 | 1 | 24025596 | 24025873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hs3st1 | hs3st1 | coding | downstream | 66731 | 23955890 ~ 23958865 (-) |
| LOC110487751 | NA | coding | downstream | 88624 | 23935691 ~ 23936972 (-) |
| LOC110489013 | clnk | coding | downstream | 96038 | 23893850 ~ 23929558 (-) |
| gsr | gsr | coding | downstream | 159151 | 23856756 ~ 23866445 (-) |
| slc30a9 | slc30a9 | coding | downstream | 170086 | 23836456 ~ 23855510 (-) |
| LOC110487753 | rab28 | coding | upstream | 200946 | 24226819 ~ 24323671 (-) |
| nkx3-2 | nkx3-2 | coding | upstream | 307315 | 24333188 ~ 24335273 (-) |
| bod1l1 | LOC106604486 | coding | upstream | 318467 | 24344340 ~ 24368050 (-) |
| LOC110489019 | LOC106604490 | coding | upstream | 436722 | 24462595 ~ 24465973 (-) |
| LOC110489021 | LOC106604492 | coding | upstream | 450735 | 24476608 ~ 24479197 (-) |
| G1229786 | NA | non-coding | downstream | 13202 | 24012153 ~ 24012394 (-) |
| G1229653 | NA | non-coding | downstream | 234572 | 23787904 ~ 23791024 (-) |
| LOC110487750 | bend4 | non-coding | downstream | 427654 | 23597045 ~ 23614287 (-) |
| G1229537 | NA | non-coding | downstream | 430992 | 23594397 ~ 23594604 (-) |
| G1229529 | NA | non-coding | downstream | 442668 | 23582137 ~ 23582928 (-) |
| G1229846 | NA | non-coding | upstream | 18266 | 24044139 ~ 24044475 (-) |
| G1229862 | NA | non-coding | upstream | 29256 | 24055129 ~ 24055512 (-) |
| G1229864 | NA | non-coding | upstream | 29924 | 24055797 ~ 24056500 (-) |
| G1229866 | NA | non-coding | upstream | 31054 | 24056927 ~ 24057988 (-) |
| G1229904 | NA | non-coding | upstream | 46747 | 24072620 ~ 24074112 (-) |
| G1229693 | znf518b | other | downstream | 152032 | 23869958 ~ 23873564 (-) |
| LOC110488986 | LOC106604455 | other | downstream | 1792305 | 22228319 ~ 22233369 (-) |
| G1225875 | NA | other | downstream | 3302360 | 20723037 ~ 20723236 (-) |
| G1225647 | LOC106604448 | other | downstream | 3555073 | 20465730 ~ 20470523 (-) |
| G1225505 | upf3b | other | downstream | 3700377 | 20321778 ~ 20325219 (-) |
| LOC110489025 | LOC106604425 | other | upstream | 530860 | 24556733 ~ 24561862 (-) |
| LOC110489477 | LOC106604496 | other | upstream | 682088 | 24706395 ~ 24709307 (-) |
| G1232240 | NA | other | upstream | 2077473 | 26103346 ~ 26165403 (-) |
| kcnk4a | LOC106604391 | other | upstream | 2954837 | 26979968 ~ 26990318 (-) |
| G1233612 | NA | other | upstream | 2966920 | 26992793 ~ 26993184 (-) |
