Gene
RNA
| Item | Value |
|---|---|
| gene id | G1229884 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 24075464 ~ 24076005 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1403549 | True | 542 | lncRNA | 0.46 | 1 | 24075464 | 24076005 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489012 | znf518b | coding | upstream | 201866 | 23868568 ~ 23873598 (+) |
| grxcr1a | grxcr1 | coding | upstream | 245230 | 23825374 ~ 23830234 (+) |
| shisa3 | shisa3 | coding | upstream | 452601 | 23616713 ~ 23622863 (+) |
| LOC118938707 | NA | coding | upstream | 501487 | 23572973 ~ 23573977 (+) |
| ky | ky | coding | upstream | 753807 | 23314948 ~ 23321657 (+) |
| LOC110489017 | fa55c | coding | downstream | 324478 | 24400483 ~ 24439204 (+) |
| LOC110489020 | LOC106609103 | coding | downstream | 375427 | 24448300 ~ 24458335 (+) |
| csn6 | cops6 | coding | downstream | 390682 | 24466687 ~ 24474857 (+) |
| gpc2 | gpc2 | coding | downstream | 463161 | 24539166 ~ 24551802 (+) |
| LOC110489028 | LOC106604497 | coding | downstream | 526067 | 24602072 ~ 24608023 (+) |
| G1229883 | NA | non-coding | upstream | 452 | 24074590 ~ 24075012 (+) |
| G1229823 | NA | non-coding | upstream | 43582 | 24031610 ~ 24031882 (+) |
| G1229788 | NA | non-coding | upstream | 61382 | 24013845 ~ 24014082 (+) |
| G1229061 | NA | non-coding | upstream | 236359 | 23836490 ~ 23839105 (+) |
| G1229894 | NA | non-coding | downstream | 16020 | 24092025 ~ 24092345 (+) |
| G1229952 | NA | non-coding | downstream | 67180 | 24143185 ~ 24143425 (+) |
| G1229968 | NA | non-coding | downstream | 89436 | 24165441 ~ 24165881 (+) |
| G1229969 | NA | non-coding | downstream | 91273 | 24167278 ~ 24167503 (+) |
| G1229974 | NA | non-coding | downstream | 95008 | 24171013 ~ 24171235 (+) |
| G1228466 | LOC100136012 | other | upstream | 1221803 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 3379327 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3761354 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 4062987 | 20012015 ~ 20012477 (+) |
| G1231863 | NA | other | downstream | 1870707 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 1886452 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2079551 | 26155556 ~ 26156812 (+) |
| ube2d2 | UBE2D2 | other | downstream | 2624225 | 26699956 ~ 26711938 (+) |
