Gene
RNA
| Item | Value |
|---|---|
| gene id | G1230528 |
| gene name | LOC107835492 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 24397090 ~ 24397317 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110498840 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1404238 | True | 228 | lncRNA | 0.50 | 1 | 24397090 | 24397317 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bod1l1 | LOC106604486 | coding | downstream | 29040 | 24344340 ~ 24368050 (-) |
| nkx3-2 | nkx3-2 | coding | downstream | 61817 | 24333188 ~ 24335273 (-) |
| LOC110487753 | rab28 | coding | downstream | 73419 | 24226819 ~ 24323671 (-) |
| hs3st1 | hs3st1 | coding | downstream | 438225 | 23955890 ~ 23958865 (-) |
| LOC110487751 | NA | coding | downstream | 460118 | 23935691 ~ 23936972 (-) |
| LOC110489019 | LOC106604490 | coding | upstream | 65278 | 24462595 ~ 24465973 (-) |
| LOC110489021 | LOC106604492 | coding | upstream | 79291 | 24476608 ~ 24479197 (-) |
| mcm7 | mcm7 | coding | upstream | 84358 | 24481675 ~ 24495562 (-) |
| LOC110487755 | LOC106604493 | coding | upstream | 100063 | 24497380 ~ 24537328 (-) |
| LOC110489025 | LOC106604425 | coding | upstream | 159769 | 24556733 ~ 24561862 (-) |
| G1230196 | NA | non-coding | downstream | 26779 | 24369957 ~ 24370311 (-) |
| G1230104 | NA | non-coding | downstream | 199173 | 24197680 ~ 24197917 (-) |
| G1230101 | NA | non-coding | downstream | 203862 | 24192874 ~ 24193228 (-) |
| G1230100 | NA | non-coding | downstream | 204520 | 24192358 ~ 24192570 (-) |
| G1230530 | NA | non-coding | upstream | 2166 | 24399483 ~ 24403326 (-) |
| G1230517 | NA | non-coding | upstream | 2449 | 24399766 ~ 24404614 (-) |
| G1230535 | NA | non-coding | upstream | 9083 | 24406400 ~ 24406655 (-) |
| G1230539 | NA | non-coding | upstream | 13469 | 24410786 ~ 24411157 (-) |
| G1230541 | NA | non-coding | upstream | 14867 | 24412184 ~ 24412937 (-) |
| G1229693 | znf518b | other | downstream | 523526 | 23869958 ~ 23873564 (-) |
| LOC110488986 | LOC106604455 | other | downstream | 2163799 | 22228319 ~ 22233369 (-) |
| G1225875 | NA | other | downstream | 3673854 | 20723037 ~ 20723236 (-) |
| G1225647 | LOC106604448 | other | downstream | 3926567 | 20465730 ~ 20470523 (-) |
| G1225505 | upf3b | other | downstream | 4071871 | 20321778 ~ 20325219 (-) |
| LOC110489477 | LOC106604496 | other | upstream | 310644 | 24706395 ~ 24709307 (-) |
| G1232240 | NA | other | upstream | 1706029 | 26103346 ~ 26165403 (-) |
| kcnk4a | LOC106604391 | other | upstream | 2583393 | 26979968 ~ 26990318 (-) |
| G1233612 | NA | other | upstream | 2595476 | 26992793 ~ 26993184 (-) |
