Gene
RNA
| Item | Value |
|---|---|
| gene id | G1230223 |
| gene name | LOC106604490 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 24442613 ~ 24465490 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| F-box/LRR-repeat protein 12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1403901 | True | 3195 | lncRNA | 0.45 | 2 | 24442613 | 24465490 |
24,420,000
24,424,000
24,428,000
24,432,000
24,436,000
24,440,000
24,444,000
24,444,000
24,448,000
24,452,000
24,456,000
24,460,000
24,464,000
24,468,000
NC_048578.1
Loading
Loading
Loading
Loading
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489017 | fa55c | coding | upstream | 3409 | 24400483 ~ 24439204 (+) |
| LOC110489012 | znf518b | coding | upstream | 569015 | 23868568 ~ 23873598 (+) |
| grxcr1a | grxcr1 | coding | upstream | 612379 | 23825374 ~ 23830234 (+) |
| shisa3 | shisa3 | coding | upstream | 819750 | 23616713 ~ 23622863 (+) |
| LOC118938707 | NA | coding | upstream | 868636 | 23572973 ~ 23573977 (+) |
| csn6 | cops6 | coding | downstream | 1197 | 24466687 ~ 24474857 (+) |
| gpc2 | gpc2 | coding | downstream | 73676 | 24539166 ~ 24551802 (+) |
| LOC110489028 | LOC106604497 | coding | downstream | 136582 | 24602072 ~ 24608023 (+) |
| LOC110489026 | fa55c | coding | downstream | 155145 | 24620635 ~ 24648487 (+) |
| LOC110487756 | LOC106604497 | coding | downstream | 247505 | 24712995 ~ 24715418 (+) |
| G1230241 | NA | non-coding | upstream | 30835 | 24411545 ~ 24411778 (+) |
| G1230232 | NA | non-coding | upstream | 45483 | 24396870 ~ 24397130 (+) |
| G1230229 | NA | non-coding | upstream | 48598 | 24393695 ~ 24394015 (+) |
| G1230165 | NA | non-coding | upstream | 105612 | 24336681 ~ 24337001 (+) |
| G1230035 | NA | non-coding | upstream | 133380 | 24308754 ~ 24309233 (+) |
| G1230273 | NA | non-coding | downstream | 30384 | 24495874 ~ 24496204 (+) |
| G1230297 | NA | non-coding | downstream | 68584 | 24534074 ~ 24534355 (+) |
| G1230302 | NA | non-coding | downstream | 71937 | 24537427 ~ 24537767 (+) |
| G1230303 | NA | non-coding | downstream | 74262 | 24539752 ~ 24539973 (+) |
| G1228466 | LOC100136012 | other | upstream | 1588952 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 3746476 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 4128503 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 4430136 | 20012015 ~ 20012477 (+) |
| G1231863 | NA | other | downstream | 1481222 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 1496967 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 1690066 | 26155556 ~ 26156812 (+) |
| ube2d2 | UBE2D2 | other | downstream | 2234740 | 26699956 ~ 26711938 (+) |
| zgc:110843 | LOC106604402 | other | downstream | 2249685 | 26715138 ~ 26725964 (+) |
