G1230592


Basic Information

Item Value
gene id G1230592
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 24548405 ~ 24548839 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1404318
GTAGAAATAGGATTAGAAAGGGGATGATGAACCAGTCATAATATTTATGTTgggtgggtggtggggggggggacttACTGTCCATGAAGTCAGTGTCCTGTCCAGCCTGTGCATGTTTCAGTCTGTTGGTGGCTACTCTGAGCTCCATGATGAGCTGTCTGGTCCTCACGTCTGGCCTGGCCATGTCCACCTCTACCTCTGGGTTATTGAGCTGACTCATCAGCCCATCGCCTGTCACGTCAGGGAGGtacctgatacacacacacacacacacatcaaaatgACATAGCAACAGCACTGAAACTAATATAAATACGATAACAAAAACACTAAATATCAGTATGATACATTCTTAGTTACCCGCTCGCATACACAAAtccccatcttctctctcccttggACTAACATCCTCCTCGACCTTTACATCTGTCTTTT

Function

NR:

description
glypican-6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1404318 True 435 lncRNA 0.46 1 24548405 24548839

Neighbor

gene id symbol gene type direction distance location
LOC110487755 LOC106604493 coding downstream 11077 24497380 ~ 24537328 (-)
mcm7 mcm7 coding downstream 52843 24481675 ~ 24495562 (-)
LOC110489021 LOC106604492 coding downstream 69208 24476608 ~ 24479197 (-)
LOC110489019 LOC106604490 coding downstream 82432 24462595 ~ 24465973 (-)
bod1l1 LOC106604486 coding downstream 180355 24344340 ~ 24368050 (-)
LOC110489025 LOC106604425 coding upstream 8247 24556733 ~ 24561862 (-)
LOC110489023 LOC106604495 coding upstream 14550 24563389 ~ 24580537 (-)
LOC110489029 NA coding upstream 50860 24599526 ~ 24682015 (-)
LOC110489477 LOC106604496 coding upstream 157556 24706395 ~ 24709307 (-)
LOC118938708 LOC106604508 coding upstream 314105 24862944 ~ 24864488 (-)
G1230591 NA non-coding downstream 1679 24546459 ~ 24546726 (-)
G1230590 NA non-coding downstream 3605 24544374 ~ 24544800 (-)
G1230587 NA non-coding downstream 8704 24539099 ~ 24539701 (-)
G1230576 NA non-coding downstream 15062 24533121 ~ 24533343 (-)
G1230515 fa55c non-coding downstream 114777 24426681 ~ 24433628 (-)
G1230584 NA non-coding upstream 13026 24561865 ~ 24603948 (-)
G1230607 NA non-coding upstream 54715 24603554 ~ 24614496 (-)
G1230609 NA non-coding upstream 57299 24606138 ~ 24715472 (-)
G1230580 NA non-coding upstream 122504 24671343 ~ 24671947 (-)
G1229693 znf518b other downstream 674841 23869958 ~ 23873564 (-)
LOC110488986 LOC106604455 other downstream 2315114 22228319 ~ 22233369 (-)
G1225875 NA other downstream 3825169 20723037 ~ 20723236 (-)
G1225647 LOC106604448 other downstream 4077882 20465730 ~ 20470523 (-)
G1225505 upf3b other downstream 4223186 20321778 ~ 20325219 (-)
G1232240 NA other upstream 1554507 26103346 ~ 26165403 (-)
kcnk4a LOC106604391 other upstream 2431871 26979968 ~ 26990318 (-)
G1233612 NA other upstream 2443954 26992793 ~ 26993184 (-)

Expression


Co-expression Network