G1231863


Basic Information

Item Value
gene id G1231863
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 25946712 ~ 25952747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1405688
ATGATTCAAGCTGAGAGACAAACACAAGTCCATGATTCAACCTGAGAGACAAACACAAGTCCATGATTCAAGCTGAGAGACAAACACAAGCCTGTGATTCAAGCTGAGAGACAAACAGAAGTCCATGATTCAACCTGAGAGACAAACACAAGTCCATGATTCAAGCTGAGAGTGATTGACGGTTGCTTGCTTGGGGCAAAGGCGATGTTGTATATGTGTATATCATCTATACGTAGTATAGATTTTAGGATTGTCTTCCACAGCAGTGTTGTCTATCTGCTGCTAAACAAGGCCTCCCGAGGGAACAATTAAGATTGATTGATAGATTGAGGCATCGATTGATGAGTGGAAGAGATACTTCCCTGCTATGGTAAGGGTTTCACCCCTGAGCCAGTCTGTCAGTTCTCCTATTATCCCCCCTTTCTCCACTTCTCCACTTTTCATCACTCCTTCCCCTTCCTGTATCATGGACTCTGCCTTATGCAGCTAGATGCTGGAAAGTGGTTGTGGCAGTATTTTGGATTCCAAGTCTCTCTTTCTAtcattcacactctctctctctctttctctctctattttggTAGGAGTGCTGTTCCACCCACTGATATGAAGATGCTTGAGGCTGACTATGTTAGAATATTCACCTACTGAAACAATaccagagagagtggagggagactgactctctcactctctccatctctctctctctctctctctctcatcctcttagTCACTCTCTCCACCGTGGAACTATTCTGTTGAACAGTGGAGTAGGAGAAGTGGAAACTGGGCCAGTTGCTTCAAGTtccccggcgtacacatcactgacaaactgaaatggtccacccacacaaacagtgtggtgaagaagatgcaacagcgcctcttcaacctcagaaggccGAAGAAATTTGCcgtggcacctaaaaccctcacaaacttttacagatgcacaatcgggAGCATCCTGTCTGGATGTAacatcgcctggtacggcaactgcaccgcccgcaaccgtgCAAGATTATcatggacaacaaccacctgagtcactgcatgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcatagctgggaccgagagactgaaaaacagcttatatctcaagtcAATGAGACTGTTAAAAAGCCATCACTAGCATACTAGAGGCTGCTGCCCAATATACATAAACTTGAAATCACTGGTAACGTTAATAAtgtaacactagtcactttaataatgtttacatatatactgtactctattctatcctattatactgtatgttagcctatgccgctctgtcattgctcatccaaatatttatatattacaTATTCCATTCCTTGACTAAGATTTGtgagtattgtgtgtattgttaggaaATTGTTAGATAGATGAAATTGTTCAACTATTATAAACAACCCCACTTCCTTCAACTATCATACATTCCCCCacttcaactatcatacacagtcccACTTAAAATATTATACACAGTCCCACTTCAACTATCATACACAGTCCTacttcaactatcatacacagccccacttcaactatcatacacagtcccACTTCAACTATTATACACAGTCCCacttcaactatcatacacagcccccacttcaactatcatacacagcccccacttcaactatcatacacagccccacttcaactatcatacacagccccacttcaactatcatacacagtcccacttccttcaactatcatacacagccccacttcaactatcatacacagccccacttcaactatcatacacagccccacttcaactatcatacacagccccacttcaactatcatacacagcCCCACTTCAACTATCATAAACAGTCCTACTTCCTTCAACCATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATTATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCTCCTACTTCCTTCAACTATCATAAACAGCCCGACTTCCTTCAACTATCATAAACAGCCCAACGTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATTATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCAACGTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCTACTTCCTTCAACTATCATAAACAGCCCAACTTCCTTCAACTATCATAAACAGCCCAACGTCCTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1405688 True 2574 TUCP 0.42 2 25946712 25952747

Neighbor

gene id symbol gene type direction distance location
LOC110487757 LOC106604428 coding upstream 1099395 24845319 ~ 24847317 (+)
LOC110489030 LOC106604504 coding upstream 1140889 24796037 ~ 24805823 (+)
LOC118938753 LOC106604427 coding upstream 1150846 24794268 ~ 24795866 (+)
LOC118938752 LOC106604500 coding upstream 1166905 24777786 ~ 24779807 (+)
LOC110489478 LOC106604427 coding upstream 1172507 24772274 ~ 24774205 (+)
LOC110487765 LOC106604415 coding downstream 640750 26593497 ~ 26596531 (+)
LOC110489093 LOC106604406 coding downstream 646206 26598953 ~ 26631213 (+)
ube2d2 UBE2D2 coding downstream 747209 26699956 ~ 26711938 (+)
zgc:110843 LOC106604402 coding downstream 762391 26715138 ~ 26725964 (+)
LOC110489089 LOC106604414 coding downstream 773994 26726741 ~ 26729567 (+)
G1231882 NA non-coding upstream 2669 25943483 ~ 25944043 (+)
G1231810 NA non-coding upstream 86934 25838753 ~ 25859778 (+)
G1231818 NA non-coding upstream 93616 25852459 ~ 25853096 (+)
G1231765 NA non-coding upstream 102734 25752775 ~ 25843978 (+)
G1231752 NA non-coding upstream 212943 25732480 ~ 25733769 (+)
G1232162 NA non-coding downstream 68318 26021065 ~ 26021502 (+)
G1232164 NA non-coding downstream 69527 26022274 ~ 26036037 (+)
G1232217 NA non-coding downstream 202809 26155556 ~ 26156812 (+)
G1232285 NA non-coding downstream 214103 26166850 ~ 26168701 (+)
G1232312 NA non-coding downstream 236989 26189736 ~ 26192281 (+)
LOC110489020 LOC106609103 other upstream 1488377 24448300 ~ 24458335 (+)
shisa3 shisa3 other upstream 2325464 23616713 ~ 23622863 (+)
G1228466 LOC100136012 other upstream 3093051 22853315 ~ 22853661 (+)
G1225840 NA other upstream 5250575 20695672 ~ 20696137 (+)
LOC110488973 nkap other upstream 5632602 20308619 ~ 20314136 (+)
G1231862 LOC106604502 other downstream 9710 25962457 ~ 25966312 (+)

Expression

G1231863 Expression in all Baseline Samples

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G1231863 Expression in each Bioproject

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G1231863 Expression in each Sample
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Co-expression Network