G1232217


Basic Information

Item Value
gene id G1232217
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 26155556 ~ 26156812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1406093
tccataccctgtacaccaccatacactgtacaccaccatacccttaacaccaccataccctgtacatcacaataccctgtacaccaccataccctgtacatcaccataccctgtacaacACCATACCTTGtgcaccaccataccctgtacatcaccatgccctgtacacctccataccctgtacaccaccacacCTTGTATACCACATACCTCTTAAACCACCATACCCTGTAaatcaccataccctgtacaccaccataccctgcacacctccataccctgtacatcaaCATACCTTGTACaactccataccctgtacacctccataccctgtacacctccataccctgtacaccaccatacactgtacacctccataccccgTACACCTACATACCCTGTACCCCTCCATACCCTCTACACCTCCATACCTGTACACCTTCatgccctgtacacctccataccctgtacacatCCATACcatgtacaccaccatacactgtacacaaacataccctgtacacctccataccctgtacaccaccataccctgtacacctccataccctgtacaccaaaataccctgtacaccaccataccctgtactcctccatacactgtacaccaacataccctgtaaACCTCTATACCCTCTACACCTCCATACACTGTGCACaatcataccctgtacacctccataccctgtacaccaccataccctgtacacctccataccctgtacacaaccataccctgtacacctccataccctgtactccaccataccctgtacaccaacatacactgtacaccaccattccatgtacacctccataccctgtacacctccatgccctgtacactgccataccctgtacacctccatatcctgtacaccaccataccctgtacacctccatgccctgtacaccaccaCACCTTGTATACCACATACTTcttacaccaccataccctgtacatcaccataccctgtacaccaccataccctgtacatcaccatacccggtacaccaacatacactgtacaccaccattCCATGTACAAAAACATACCCTGAACACtatcataccctgtacaccatcataccctgtacaccaccatacccttaacaccaccataccctgtacatcacaataccctgtacaccaccatacactgtacaccaa
>TU1406094
tccataccctgtacaccaccatacactgtacaccaccatacccttaacaccaccataccctgtacatcacaataccctgtacaccaccataccctgtacacctccataccctgtacacctccataccctgtacaccaccatacactgtacacctccataccccgTACACCTACATACCCTGTACCCCTCCATACCCTCTACACCTCCATACCTGTACACCTTCatgccctgtacacctccataccctgtacacatCCATACcatgtacaccaccatacactgtacacaaacataccctgtacacctccataccctgtacaccaccataccctgtacacctccataccctgtacaccaaaataccctgtacaccaccataccctgtactcctccatacactgtacaccaacataccctgtaaACCTCTATACCCTCTACACCTCCATACACTGTGCACaatcataccctgtacacctccataccctgtacaccaccataccctgtacacctccataccctgtacacaaccataccctgtacacctccataccctgtactccaccataccctgtacaccaacatacactgtacaccaccattccatgtacacctccataccctgtacacctccatgccctgtacactgccataccctgtacaccaccatactcTGTAAACCTCcgtaccctgtacacctccataccctgtacaccatcataccctgtacacctccatatcctgtacaccaccataccctgtacacctccatgccctgtacaccaccaCACCTTGTATACCACATACTTcttacaccaccataccctgtacatcaccataccctgtacaccaccataccctgtacatcaccatacccggtacaccaacatacactgtacaccaccattCCATGTACAAAAACATACCCTGAACACtatcataccctgtacaccatcataccctgtacaccaccatacccttaacaccaccataccctgtacatcacaataccctgtacaccaccatacactgtacaccaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106535092

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1406093 False 1189 lncRNA 0.49 2 26155556 26156812
TU1406094 True 1037 TUCP 0.49 2 26155556 26156812
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110487757 LOC106604428 coding upstream 1308239 24845319 ~ 24847317 (+)
LOC110489030 LOC106604504 coding upstream 1349733 24796037 ~ 24805823 (+)
LOC118938753 LOC106604427 coding upstream 1359690 24794268 ~ 24795866 (+)
LOC118938752 LOC106604500 coding upstream 1375749 24777786 ~ 24779807 (+)
LOC110489478 LOC106604427 coding upstream 1381351 24772274 ~ 24774205 (+)
LOC110487765 LOC106604415 coding downstream 436685 26593497 ~ 26596531 (+)
LOC110489093 LOC106604406 coding downstream 442141 26598953 ~ 26631213 (+)
ube2d2 UBE2D2 coding downstream 543144 26699956 ~ 26711938 (+)
zgc:110843 LOC106604402 coding downstream 558326 26715138 ~ 26725964 (+)
LOC110489089 LOC106604414 coding downstream 569929 26726741 ~ 26729567 (+)
G1232164 NA non-coding upstream 119519 26022274 ~ 26036037 (+)
G1232162 NA non-coding upstream 134054 26021065 ~ 26021502 (+)
G1231882 NA non-coding upstream 211513 25943483 ~ 25944043 (+)
G1231810 NA non-coding upstream 295778 25838753 ~ 25859778 (+)
G1231818 NA non-coding upstream 302460 25852459 ~ 25853096 (+)
G1232285 NA non-coding downstream 10038 26166850 ~ 26168701 (+)
G1232312 NA non-coding downstream 32924 26189736 ~ 26192281 (+)
G1232315 NA non-coding downstream 36020 26192832 ~ 26193077 (+)
G1232318 NA non-coding downstream 37766 26194578 ~ 26194879 (+)
G1232322 NA non-coding downstream 39682 26196494 ~ 26196725 (+)
G1231862 LOC106604502 other upstream 189244 25962457 ~ 25966312 (+)
G1231863 NA other upstream 202809 25946712 ~ 25952747 (+)
LOC110489020 LOC106609103 other upstream 1697221 24448300 ~ 24458335 (+)
shisa3 shisa3 other upstream 2534308 23616713 ~ 23622863 (+)
G1228466 LOC100136012 other upstream 3301895 22853315 ~ 22853661 (+)
LOC110489086 LOC106604400 other downstream 602375 26759123 ~ 26801405 (+)
G1233046 NA other downstream 672879 26829691 ~ 26830102 (+)

Expression

G1232217 Expression in all Baseline Samples

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G1232217 Expression in each Bioproject

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G1232217 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
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Co-expression Network