Gene
RNA
| Item | Value |
|---|---|
| gene id | G1232318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 26194578 ~ 26194879 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1406234 | True | 302 | lncRNA | 0.41 | 1 | 26194578 | 26194879 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487757 | LOC106604428 | coding | upstream | 1347261 | 24845319 ~ 24847317 (+) |
| LOC110489030 | LOC106604504 | coding | upstream | 1388755 | 24796037 ~ 24805823 (+) |
| LOC118938753 | LOC106604427 | coding | upstream | 1398712 | 24794268 ~ 24795866 (+) |
| LOC118938752 | LOC106604500 | coding | upstream | 1414771 | 24777786 ~ 24779807 (+) |
| LOC110489478 | LOC106604427 | coding | upstream | 1420373 | 24772274 ~ 24774205 (+) |
| LOC110487765 | LOC106604415 | coding | downstream | 398618 | 26593497 ~ 26596531 (+) |
| LOC110489093 | LOC106604406 | coding | downstream | 404074 | 26598953 ~ 26631213 (+) |
| ube2d2 | UBE2D2 | coding | downstream | 505077 | 26699956 ~ 26711938 (+) |
| zgc:110843 | LOC106604402 | coding | downstream | 520259 | 26715138 ~ 26725964 (+) |
| LOC110489089 | LOC106604414 | coding | downstream | 531862 | 26726741 ~ 26729567 (+) |
| G1232315 | NA | non-coding | upstream | 1501 | 26192832 ~ 26193077 (+) |
| G1232312 | NA | non-coding | upstream | 2297 | 26189736 ~ 26192281 (+) |
| G1232285 | NA | non-coding | upstream | 25877 | 26166850 ~ 26168701 (+) |
| G1232217 | NA | non-coding | upstream | 37766 | 26155556 ~ 26156812 (+) |
| G1232164 | NA | non-coding | upstream | 158541 | 26022274 ~ 26036037 (+) |
| G1232322 | NA | non-coding | downstream | 1615 | 26196494 ~ 26196725 (+) |
| G1232486 | NA | non-coding | downstream | 112375 | 26307254 ~ 26307461 (+) |
| G1232523 | NA | non-coding | downstream | 141725 | 26336604 ~ 26336821 (+) |
| G1232526 | NA | non-coding | downstream | 145482 | 26340361 ~ 26340594 (+) |
| G1232528 | NA | non-coding | downstream | 147892 | 26342771 ~ 26342971 (+) |
| G1231862 | LOC106604502 | other | upstream | 228266 | 25962457 ~ 25966312 (+) |
| G1231863 | NA | other | upstream | 241831 | 25946712 ~ 25952747 (+) |
| LOC110489020 | LOC106609103 | other | upstream | 1736243 | 24448300 ~ 24458335 (+) |
| shisa3 | shisa3 | other | upstream | 2573330 | 23616713 ~ 23622863 (+) |
| LOC110489086 | LOC106604400 | other | downstream | 564308 | 26759123 ~ 26801405 (+) |
| G1233046 | NA | other | downstream | 634812 | 26829691 ~ 26830102 (+) |
