Gene
RNA
| Item | Value |
|---|---|
| gene id | G1233731 |
| gene name | LOC106675328 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 27405127 ~ 27405510 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC106675328 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1407839 | True | 384 | lncRNA | 0.50 | 1 | 27405127 | 27405510 |
27,402,800
27,403,200
27,403,600
27,404,000
27,404,400
27,404,800
27,405,200
27,405,600
27,406,000
27,406,400
27,406,800
27,407,200
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| macrod1 | macd1 | coding | downstream | 1623 | 27284444 ~ 27403504 (-) |
| LOC110489055 | NA | coding | downstream | 176229 | 27222807 ~ 27247113 (-) |
| scyl1 | LOC106604377 | coding | downstream | 184669 | 27202019 ~ 27220458 (-) |
| ints5 | LOC106604380 | coding | downstream | 222826 | 27178502 ~ 27182301 (-) |
| ganab | LOC106604381 | coding | downstream | 231264 | 27153707 ~ 27173863 (-) |
| rnaseh2c | rnh2c | coding | upstream | 23798 | 27429308 ~ 27432335 (-) |
| LOC110489047 | LOC106604353 | coding | upstream | 26953 | 27432463 ~ 27437526 (-) |
| LOC110489046 | LOC106604367 | coding | upstream | 60918 | 27466428 ~ 27470738 (-) |
| pola2 | pola2 | coding | upstream | 65349 | 27470859 ~ 27476807 (-) |
| zgc:195212 | cssa05h11orf80 | coding | upstream | 71375 | 27476885 ~ 27481756 (-) |
| G1233722 | NA | non-coding | downstream | 26468 | 27375453 ~ 27378659 (-) |
| G1233708 | NA | non-coding | downstream | 38335 | 27336320 ~ 27366792 (-) |
| G1233702 | NA | non-coding | downstream | 79069 | 27325694 ~ 27326058 (-) |
| G1233688 | NA | non-coding | downstream | 98970 | 27305300 ~ 27306157 (-) |
| G1233687 | NA | non-coding | downstream | 100745 | 27303607 ~ 27304382 (-) |
| G1233786 | NA | non-coding | upstream | 175674 | 27581184 ~ 27582698 (-) |
| G1233810 | NA | non-coding | upstream | 205527 | 27611037 ~ 27612865 (-) |
| G1233814 | NA | non-coding | upstream | 208728 | 27614238 ~ 27620316 (-) |
| G1233820 | NA | non-coding | upstream | 219796 | 27625306 ~ 27625513 (-) |
| G1233833 | NA | non-coding | upstream | 228463 | 27633973 ~ 27634195 (-) |
| si:dkeyp-115e12.6 | LOC106604388 | other | downstream | 403823 | 26995966 ~ 27001492 (-) |
| G1233612 | NA | other | downstream | 411943 | 26992793 ~ 26993184 (-) |
| kcnk4a | LOC106604391 | other | downstream | 414809 | 26979968 ~ 26990318 (-) |
| G1232240 | NA | other | downstream | 1239724 | 26103346 ~ 26165403 (-) |
| LOC110489477 | LOC106604496 | other | downstream | 2695820 | 24706395 ~ 24709307 (-) |
| G1234483 | NA | other | upstream | 641068 | 28046578 ~ 28050952 (-) |
| med7 | med7 | other | upstream | 727430 | 28132248 ~ 28134104 (-) |
| G1234578 | NA | other | upstream | 808813 | 28214323 ~ 28215776 (-) |
| G1234595 | NA | other | upstream | 835409 | 28240919 ~ 28242820 (-) |
| G1235679 | NA | other | upstream | 1813918 | 29219428 ~ 29220097 (-) |
