Gene
RNA
| Item | Value |
|---|---|
| gene id | G1238363 |
| gene name | LOC106612212 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 32427992 ~ 32429975 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| BTB/POZ domain-containing protein KCTD12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1413314 | False | 1984 | TUCP | 0.52 | 1 | 32427992 | 32429975 |
| TU1413315 | True | 1890 | lncRNA | 0.52 | 1 | 32427992 | 32429881 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-153b23.7 | LOC106604275 | coding | downstream | 558017 | 31859266 ~ 31869975 (-) |
| LOC110489137 | LOC106612186 | coding | downstream | 592042 | 31741516 ~ 31835950 (-) |
| LOC118938722 | NA | coding | downstream | 671189 | 31754266 ~ 31756803 (-) |
| LOC110489134 | LOC106604270 | coding | downstream | 704521 | 31720562 ~ 31723471 (-) |
| cuedc2 | cuedc2 | coding | downstream | 709076 | 31716123 ~ 31718916 (-) |
| LOC110489151 | LOC106604257 | coding | upstream | 141253 | 32571134 ~ 32573704 (-) |
| LOC110489150 | LOC106604256 | coding | upstream | 147295 | 32577176 ~ 32610818 (-) |
| LOC110489154 | NA | coding | upstream | 275541 | 32705422 ~ 32714985 (-) |
| LOC110489153 | LOC106604217 | coding | upstream | 302741 | 32732622 ~ 32739363 (-) |
| LOC110489155 | LOC106604251 | coding | upstream | 311621 | 32741502 ~ 32743616 (-) |
| G1238360 | NA | non-coding | downstream | 2000 | 32425615 ~ 32425992 (-) |
| G1238350 | NA | non-coding | downstream | 20192 | 32407086 ~ 32407800 (-) |
| G1238349 | NA | non-coding | downstream | 22040 | 32405694 ~ 32405952 (-) |
| G1238327 | NA | non-coding | downstream | 56105 | 32371561 ~ 32371887 (-) |
| G1238326 | NA | non-coding | downstream | 56533 | 32371245 ~ 32371459 (-) |
| G1238362 | NA | non-coding | upstream | 406 | 32430287 ~ 32436555 (-) |
| G1238366 | NA | non-coding | upstream | 13820 | 32443701 ~ 32443937 (-) |
| G1238374 | NA | non-coding | upstream | 23856 | 32453737 ~ 32453938 (-) |
| G1238378 | NA | non-coding | upstream | 32248 | 32462129 ~ 32462373 (-) |
| G1238381 | NA | non-coding | upstream | 39752 | 32469633 ~ 32470285 (-) |
| G1238347 | NA | other | downstream | 27092 | 32400413 ~ 32400900 (-) |
| G1238344 | NA | other | downstream | 28813 | 32396761 ~ 32399179 (-) |
| G1238233 | LOC106604321 | other | downstream | 103437 | 32320018 ~ 32324555 (-) |
| G1238232 | LOC106604321 | other | downstream | 109934 | 32317256 ~ 32318058 (-) |
| G1237388 | LOC106604302 | other | downstream | 1065310 | 31350043 ~ 31362682 (-) |
| G1239090 | ogt | other | upstream | 265995 | 32695876 ~ 32696402 (-) |
| LOC110489172 | LOC106604229 | other | upstream | 1858701 | 34288581 ~ 34292245 (-) |
| G1240399 | NA | other | upstream | 1907942 | 34337823 ~ 34342891 (-) |
| G1240533 | NA | other | upstream | 2211611 | 34641492 ~ 34642037 (-) |
