Gene
RNA
| Item | Value |
|---|---|
| gene id | G1238457 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 32564177 ~ 32564440 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1413421 | True | 264 | lncRNA | 0.48 | 1 | 32564177 | 32564440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489140 | LOC106612212 | coding | upstream | 134102 | 32427794 ~ 32430075 (+) |
| LOC110489141 | LOC106604320 | coding | upstream | 140098 | 32398296 ~ 32424079 (+) |
| zgc:66447 | LOC106604327 | coding | upstream | 166308 | 32379198 ~ 32397869 (+) |
| LOC110489144 | NA | coding | upstream | 193051 | 32359890 ~ 32371126 (+) |
| LOC110489145 | LOC106604324 | coding | upstream | 206693 | 32353690 ~ 32357484 (+) |
| LOC110489148 | LOC106604253 | coding | downstream | 101822 | 32666262 ~ 32701558 (+) |
| LOC110487782 | LOC106604250 | coding | downstream | 179168 | 32743608 ~ 32754406 (+) |
| LOC110489156 | LOC106604248 | coding | downstream | 201993 | 32766433 ~ 32774618 (+) |
| LOC110487783 | LOC106612196 | coding | downstream | 214025 | 32778465 ~ 32812861 (+) |
| LOC110489160 | LOC106604244 | coding | downstream | 251341 | 32815781 ~ 32827231 (+) |
| G1238456 | NA | non-coding | upstream | 4550 | 32559406 ~ 32559627 (+) |
| G1238436 | NA | non-coding | upstream | 16613 | 32547317 ~ 32547564 (+) |
| G1238420 | NA | non-coding | upstream | 38281 | 32525668 ~ 32525896 (+) |
| G1238407 | NA | non-coding | upstream | 54566 | 32509388 ~ 32509611 (+) |
| G1238404 | NA | non-coding | upstream | 57222 | 32505553 ~ 32506955 (+) |
| G1238467 | LOC106604256 | non-coding | downstream | 14787 | 32579227 ~ 32580407 (+) |
| G1238472 | NA | non-coding | downstream | 22539 | 32586979 ~ 32587219 (+) |
| G1238474 | NA | non-coding | downstream | 29277 | 32593717 ~ 32594027 (+) |
| G1238477 | NA | non-coding | downstream | 33517 | 32597957 ~ 32598339 (+) |
| G1238482 | NA | non-coding | downstream | 52136 | 32616576 ~ 32616780 (+) |
| pin4 | pin4 | other | upstream | 1269410 | 31288367 ~ 31294783 (+) |
| G1236704 | LOC106612150 | other | upstream | 1677026 | 30882949 ~ 30887151 (+) |
| G1236717 | NA | other | upstream | 1699690 | 30864051 ~ 30864487 (+) |
| G1235511 | NA | other | upstream | 2915134 | 29646994 ~ 29649043 (+) |
| G1239015 | NA | other | downstream | 1214038 | 33773304 ~ 33799267 (+) |
| G1241074 | NA | other | downstream | 2715911 | 35280351 ~ 35280667 (+) |
| G1241386 | NA | other | downstream | 3241961 | 35806401 ~ 35807149 (+) |
| G1241466 | NA | other | downstream | 3461658 | 36026098 ~ 36033170 (+) |
| G1242376 | NA | other | downstream | 4101563 | 36666003 ~ 36666719 (+) |
