Gene
RNA
| Item | Value |
|---|---|
| gene id | G1239090 |
| gene name | ogt |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 32695876 ~ 32696402 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ogt | Enables phosphatidylinositol-3,4,5-trisphosphate binding activity; protein N-acetylglucosaminyltransferase activity; and protein O-GlcNAc transferase activity. Involved in several processes, including histone modification; regulation of cellular protein metabolic process; and regulation of nucleobase-containing compound metabolic process. Located in cytosol; nucleoplasm; and plasma membrane. Part of histone acetyltransferase complex and protein N-acetylglucosaminyltransferase complex. Implicated in non-syndromic X-linked intellectual disability 106. Biomarker of aortic valve stenosis. |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1414140 | True | 496 | TUCP | 0.54 | 2 | 32695876 | 32696402 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489150 | LOC106604256 | coding | downstream | 85058 | 32577176 ~ 32610818 (-) |
| LOC110489151 | LOC106604257 | coding | downstream | 122172 | 32571134 ~ 32573704 (-) |
| si:ch211-153b23.7 | LOC106604275 | coding | downstream | 825901 | 31859266 ~ 31869975 (-) |
| LOC110489137 | LOC106612186 | coding | downstream | 859926 | 31741516 ~ 31835950 (-) |
| LOC118938722 | NA | coding | downstream | 939073 | 31754266 ~ 31756803 (-) |
| LOC110489154 | NA | coding | upstream | 9020 | 32705422 ~ 32714985 (-) |
| LOC110489153 | LOC106604217 | coding | upstream | 36220 | 32732622 ~ 32739363 (-) |
| LOC110489155 | LOC106604251 | coding | upstream | 45100 | 32741502 ~ 32743616 (-) |
| LOC110489157 | LOC106604249 | coding | upstream | 62480 | 32758882 ~ 32766211 (-) |
| LOC110489159 | LOC106612194 | coding | upstream | 130907 | 32827309 ~ 32841094 (-) |
| G1239118 | NA | non-coding | downstream | 48506 | 32647109 ~ 32647370 (-) |
| G1239108 | NA | non-coding | downstream | 69876 | 32625554 ~ 32626000 (-) |
| G1239107 | NA | non-coding | downstream | 71532 | 32623943 ~ 32624344 (-) |
| G1239104 | NA | non-coding | downstream | 74850 | 32620808 ~ 32621026 (-) |
| G1239135 | NA | non-coding | upstream | 19110 | 32715512 ~ 32715736 (-) |
| G1239136 | NA | non-coding | upstream | 20298 | 32716700 ~ 32716914 (-) |
| G1239142 | NA | non-coding | upstream | 37148 | 32733550 ~ 32734088 (-) |
| G1239155 | NA | non-coding | upstream | 58133 | 32754535 ~ 32757245 (-) |
| G1239164 | NA | non-coding | upstream | 81596 | 32777998 ~ 32778324 (-) |
| G1238363 | LOC106612212 | other | downstream | 265901 | 32427992 ~ 32429975 (-) |
| G1238347 | NA | other | downstream | 294976 | 32400413 ~ 32400900 (-) |
| G1238344 | NA | other | downstream | 296697 | 32396761 ~ 32399179 (-) |
| G1238233 | LOC106604321 | other | downstream | 371321 | 32320018 ~ 32324555 (-) |
| LOC110489172 | LOC106604229 | other | upstream | 1592180 | 34288581 ~ 34292245 (-) |
| G1240399 | NA | other | upstream | 1641421 | 34337823 ~ 34342891 (-) |
| G1240533 | NA | other | upstream | 1945090 | 34641492 ~ 34642037 (-) |
| G1240534 | NA | other | upstream | 1946733 | 34643135 ~ 34644152 (-) |
| G1240963 | NA | other | upstream | 2365521 | 35061923 ~ 35062319 (-) |
