Gene
RNA
| Item | Value |
|---|---|
| gene id | G1239164 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 32777998 ~ 32778324 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1414236 | True | 327 | lncRNA | 0.42 | 1 | 32777998 | 32778324 |
32,776,000
32,776,400
32,776,800
32,777,200
32,777,600
32,778,000
32,778,400
32,778,800
32,779,200
32,779,600
32,780,000
32,780,400
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489157 | LOC106604249 | coding | downstream | 11787 | 32758882 ~ 32766211 (-) |
| LOC110489155 | LOC106604251 | coding | downstream | 34382 | 32741502 ~ 32743616 (-) |
| LOC110489153 | LOC106604217 | coding | downstream | 38635 | 32732622 ~ 32739363 (-) |
| LOC110489154 | NA | coding | downstream | 63013 | 32705422 ~ 32714985 (-) |
| LOC110489150 | LOC106604256 | coding | downstream | 167180 | 32577176 ~ 32610818 (-) |
| LOC110489159 | LOC106612194 | coding | upstream | 48985 | 32827309 ~ 32841094 (-) |
| pcdh20 | LOC106604240 | coding | upstream | 80694 | 32859018 ~ 32869447 (-) |
| LOC110515721 | nlgn3 | coding | upstream | 112644 | 32890968 ~ 33341320 (-) |
| LOC110487786 | LOC105025636 | coding | upstream | 720776 | 33499100 ~ 33753408 (-) |
| LOC100305231 | kif3a | coding | upstream | 1243211 | 34021535 ~ 34025654 (-) |
| G1239155 | NA | non-coding | downstream | 20753 | 32754535 ~ 32757245 (-) |
| G1239142 | NA | non-coding | downstream | 43910 | 32733550 ~ 32734088 (-) |
| G1239136 | NA | non-coding | downstream | 61084 | 32716700 ~ 32716914 (-) |
| G1239135 | NA | non-coding | downstream | 62262 | 32715512 ~ 32715736 (-) |
| G1239118 | NA | non-coding | downstream | 130628 | 32647109 ~ 32647370 (-) |
| G1239169 | NA | non-coding | upstream | 18666 | 32796990 ~ 32797519 (-) |
| G1239171 | NA | non-coding | upstream | 28410 | 32806734 ~ 32807425 (-) |
| G1239089 | NA | non-coding | upstream | 47672 | 32825996 ~ 32827220 (-) |
| G1239208 | NA | non-coding | upstream | 103560 | 32881884 ~ 32882097 (-) |
| G1239211 | NA | non-coding | upstream | 105001 | 32883325 ~ 32883529 (-) |
| G1239090 | ogt | other | downstream | 81596 | 32695876 ~ 32696402 (-) |
| G1238363 | LOC106612212 | other | downstream | 348023 | 32427992 ~ 32429975 (-) |
| G1238347 | NA | other | downstream | 377098 | 32400413 ~ 32400900 (-) |
| G1238344 | NA | other | downstream | 378819 | 32396761 ~ 32399179 (-) |
| LOC110489172 | LOC106604229 | other | upstream | 1510258 | 34288581 ~ 34292245 (-) |
| G1240399 | NA | other | upstream | 1559499 | 34337823 ~ 34342891 (-) |
| G1240533 | NA | other | upstream | 1863168 | 34641492 ~ 34642037 (-) |
| G1240534 | NA | other | upstream | 1864811 | 34643135 ~ 34644152 (-) |
| G1240963 | NA | other | upstream | 2283599 | 35061923 ~ 35062319 (-) |
