Gene
RNA
| Item | Value |
|---|---|
| gene id | G1239208 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 32881884 ~ 32882097 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1414289 | True | 214 | lncRNA | 0.38 | 1 | 32881884 | 32882097 |
32,879,600
32,880,000
32,880,400
32,880,800
32,881,200
32,881,600
32,882,000
32,882,400
32,882,800
32,883,200
32,883,600
32,884,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pcdh20 | LOC106604240 | coding | downstream | 12437 | 32859018 ~ 32869447 (-) |
| LOC110489159 | LOC106612194 | coding | downstream | 40790 | 32827309 ~ 32841094 (-) |
| LOC110489157 | LOC106604249 | coding | downstream | 115673 | 32758882 ~ 32766211 (-) |
| LOC110489155 | LOC106604251 | coding | downstream | 138268 | 32741502 ~ 32743616 (-) |
| LOC110489153 | LOC106604217 | coding | downstream | 142521 | 32732622 ~ 32739363 (-) |
| LOC110515721 | nlgn3 | coding | upstream | 8871 | 32890968 ~ 33341320 (-) |
| LOC110487786 | LOC105025636 | coding | upstream | 617003 | 33499100 ~ 33753408 (-) |
| LOC100305231 | kif3a | coding | upstream | 1139438 | 34021535 ~ 34025654 (-) |
| sh3rf2 | LOC106604221 | coding | upstream | 1144913 | 34027010 ~ 34071574 (-) |
| LOC110489168 | LOC106604222 | coding | upstream | 1252518 | 34134615 ~ 34168443 (-) |
| G1239089 | NA | non-coding | downstream | 54664 | 32825996 ~ 32827220 (-) |
| G1239171 | NA | non-coding | downstream | 74459 | 32806734 ~ 32807425 (-) |
| G1239169 | NA | non-coding | downstream | 84365 | 32796990 ~ 32797519 (-) |
| G1239164 | NA | non-coding | downstream | 103560 | 32777998 ~ 32778324 (-) |
| G1239155 | NA | non-coding | downstream | 124639 | 32754535 ~ 32757245 (-) |
| G1239211 | NA | non-coding | upstream | 1228 | 32883325 ~ 32883529 (-) |
| G1239212 | NA | non-coding | upstream | 2715 | 32884812 ~ 32885045 (-) |
| G1239218 | NA | non-coding | upstream | 23018 | 32905115 ~ 32905710 (-) |
| G1239227 | LOC100194703 | non-coding | upstream | 47035 | 32929132 ~ 32929458 (-) |
| G1239090 | ogt | other | downstream | 185482 | 32695876 ~ 32696402 (-) |
| LOC110489150 | LOC106604256 | other | downstream | 302937 | 32577176 ~ 32610818 (-) |
| G1238363 | LOC106612212 | other | downstream | 451909 | 32427992 ~ 32429975 (-) |
| G1238347 | NA | other | downstream | 480984 | 32400413 ~ 32400900 (-) |
| G1238344 | NA | other | downstream | 482705 | 32396761 ~ 32399179 (-) |
| LOC110489172 | LOC106604229 | other | upstream | 1406485 | 34288581 ~ 34292245 (-) |
| G1240399 | NA | other | upstream | 1455726 | 34337823 ~ 34342891 (-) |
| G1240533 | NA | other | upstream | 1759395 | 34641492 ~ 34642037 (-) |
| G1240534 | NA | other | upstream | 1761038 | 34643135 ~ 34644152 (-) |
| G1240963 | NA | other | upstream | 2179826 | 35061923 ~ 35062319 (-) |
