G1240399


Basic Information

Item Value
gene id G1240399
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 34337823 ~ 34342891 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1415705
GCAAAAACGAATCTATACAAGATAGGGTATAATCAATAACTTTTATAAGATAACATATTTTAAGGTATTATAGATAAACTCTTGGACACTTCAGGataatattaatatttttcagTAGTTTTAGTGTCTCGTATTGTTCTCAATTTCAGACAAATTCAACAATCCACCTTAATGACTCATCTATAGCCATCAAATGATACATTCCCAACTGTTAACACCACCCCACAAATCACATTATTATTTAAAAGTAGGCATACTAATCCATAGatcatatgggcacaAAGTCAGTATGTTAAATCAAGTTCTTATTCCTTATAAATAGACAACCCTAATAACTTCATACAGGTTGCAGCACCCTTAATGAAACTCATACATTACAATTTCACAGTGTAATAAGACAAGTTACTAGTCAAAGGCAATAAATAgaaccaggggcgcaactttggttttagaagtggggggggacATAATTATAATTTTTGTTATCCAGTCGGATATACACTCCAAACAGCCGACCCGACCGCTcagaggcgtccgcatggtcctaaagcatacCGTTGCCTCATTTTGTAATGTCCCCCCCTGTCCCAAGAGAAAGTTGCAACCCTAATTAGAACAgtaacctggggggggggggggggggctgacctAGACAACAGCAAGGAAAGCACATTCGTTAATTAAATTAATTTATAACCTCTGGGGGCTTTTAATCTGAATATTGTTATAttatagcctgggtgccagtctgcttctgctctcttgccaactgCTTTCTAGAATAGAaaaagactggcacccaggctagttGTCTAATGCTTATTTAAATCCATCTGTAAAATGCCATGCAGAGAAGCATGCTGTAGAGCAGGGttttctgttctacctaataattaattgcacacacctggtggcccaggtctaaatcagtccctgattaaaggGGGAACAATAATGATCacgtttacatgcacaccaatatccCGTTATTATTCAGGATACTCAAGTATTCTGTTTTTGAGTTGACGCATATAAACATCATATCTCATTTATAATAACCCGAAAAAGCTTGTAACCCGGTTCTGATAAACCTGGATAAGATGCATGGGATATgatcagtggcgacccgtcattcaagGCAGGTGGCGCTTTGAGCCCTAAATTTATTtgggttgcctgttttgcatgtttttTTTGAATTAATACcggtcacatatcagtttgcaaacaatgtaaacaacatttatttttatttttataattgaGTCAATAAAGCCACATAAGCCTCTTTTTTGCTttgttgagtaaggcagctccaaaatgcaggtgtgtcagcctagctcagtgctttctgtggtggtggggcagccagcggaaaatacagagtgtaggggtgggtaatgttctctagttgcgccgtgattggctcagtgttctgtcactcatggggacactatgttaccgccaaatctaagggtagagcttgaaaattcaagccccttgggtgctgccatagacttacataagaagtgcccttccaagaaggctcgaggtcattggccacaaataaaatgacgtcaaatcacgttatatttacagtagctttgattggacttcaaaatcttagctggcagtcatcatcatgaatcaagtcgacaatctagtggtaaatcctttttaatccttgtcatatgaagagaaataatgaagataaaacgtatcagtgctcatcgaccattggacataaacatctaccttcttgccctttgtgctgttgtctatgCCCAattatgtttgtaccatgttttgtgctgctaccatgttgtgttgctaccatactgtgtggtcatgtgttgctgccttgctatgttgttgtcttaggtctctctttatgtagtgttgtgttgtctctcttgtcgtgatgtgtgttttttgttccatatttatatatattttttaaaatcccagcccctgttccgcaggaggccttttgccttttggtaggctgtcattgtaaataatcatttgtttttaactgacttgcctagttaaataaaggttaaataaaaaataatccaaAATGTCATAAAATTAAaaattacacaacaagttggaaattacaaattcaacaatgagtggtttggaaggaatcagtggctaactgcaagcacagcacagcaatcactagcctgctattcagtggagtgggtgtgtggtccaaagtctgggtttaaggatcTCTTGTTCAAGttaaaaatgataaacattcaacactgGCCATCCTgtctgggaactctgaaaaaacgaACTTggactgggaaaatatgttttgaacggtcatccaactccgAAGTGTACGTGTGAACtttggcctctttctagagctacgacctaaAGATCACtaacgtcatcatgattcaaccttgtttttttcacagttgtcttgaaagcgccATTAGTCCAGAGAATGACACTTTTTttatacccctttttctcccccattttcgtggtatccaattgtttagtagctactatcttgtctcatcgctacaactcccatatgggctcgggagagacgaaggttgaaagtcatgcgtcctccgatacacaacccaaccaagccgcactgcttcttaacacagcacgcatccaacccggaagccagccgcaccaatgtgtcggaggaaacacggtgtacctggcaaccttggttagtgtgcactgcgcccggcccgccacaggagtcgctggtacgcgatgagacaaggacatccctaccggccaaaccctccctaacccggacgacgctgggccaattgtgcgtcgccccacggacctcccggttgcggccggttacgacagagcctgggcgcaaacccagagtctctggtggaagATCTGGCGCTGCAGTACcacttaaccactgcgccacctgggaggagaatgacaaaatttgcccacgaaggactaCCGCACCACCTTCTTGTTCAAGTGGGCACAACACAACATGGTGAGTCCAGAAATGTATTGTAcactgctgcataaattatgtaatatgccagggagataggattactttcttagctacagtatacataagtgtatgttgtgtaagtAAACttttagtagcccatgtgcctcaccctaattaTTTGGTCTGTTTACCCTtattaattttgcctactgttctgacttggtggtgcacatgtagcctataacctgtttaaGAGAAATGTAGTCATTGAATATTTTAAGAgttttcattgtctgtttatgGGACATTTTATTTGttctacggttctgacttggtgtacagggagaacggcccatgttctgaattctgtcactgtacatttcaaaagtgctgaacaagtaGTTATATTGACTAGACAGTCCTAGCTCGCTCATCAATCTCGTAATCCaaattatggattgcctcttatccgcttgtcgtccccttatgccatagtttgtacatctcaattgcgACCCAgttcagtagaaaccacatttgtctaagcaagtcagccatatcagctatgtttcattttaaaaggcagtaaatgaggctgactTAACTGtatcgctgccagacaaggctccactgatagccaggtgtagcagtgataaagtgttgggactctgctgttggcacagctttatgtaggccctaacagtttgtgggcaccgtttgtcaccgttataatgcaatgaatgtattgtttagtgttgtgtttgtgtggcgTAGTGGCTCGACTAGCTTGCCCCACAAAGATTTCACACGCCATTCGATATGACGACGTTAGACGGGATACTGTGGCATGATAACATCTCATCCCGTTCACTGTTGTTTTTTTGCGGTCTACGCAGGCTCAGTTTCGCCTATCATGAGTATTGTGTGATGTTTTCATCTTgactgtcaaacaaatcacttaaaAAAGGTAGGCTACCTGCCCAGTAATTCAATAGTAACTGAGCTGTAATTCATTTACTACTGGCTACTTTCACCCCTAATTTAGAAAcatttctgcttataatttcctacatttggTAGACCATTAATTTGTCAACTATAGTTTGATTCATGCAAACTATAAACTTCTCTCATAATTTATTGCCCCAGAAAACTAAATAAAGTAGTGACATCACCAGAATAATATTTTACATCGATAGAAAGATTAGGCTACGAATGCATTCAAATTAACACCTGCAAAGTTGTTTCTcgtttagggaccggggagaaaacGCAATAATTCCAAAACAGTGGAAAGCTTGGTCTTGTGAAAAATGTCCAAAACATGTAATCAGTTTGAAGGGTTTTAAGGAAATGAAAACCTGAGAAAACGATGAAACAAGTTTCTGTTAAGACTTCAGTTCGACTTGGGTGCATGTTTGATGCGGTTGAAATACTGTCTGCTTGAATAACAGTGTCAAAGATAATGCATCACACAAAGATAATCAAAGATAATGCTTCACATGTGCATTTGCATTTTCTCAAGAAATGCTGAAAAAAATGAATTATTTTTCTCCACTCATGTTTCCCAGCCAAAATTAACATTTGTTGTATAATTTCACTGCAAGAAATTCATAATTCTGcaagagttaatattatattacactacATGAGGTTATAATCTTTACACTCAGTGTCTATATTTCAGTTACTAATCCATTTACGCCATATAATTAAATGAGGAATATTCAGTTTATTCATGGATGCAGGGATACAAAGTTGAGTTTGACAGCTTTAGAGCATCAGCTTTTATTTTTATGAACCAAGTTTGCATCCAaagtggaaccctattccctatatagtgcactactttatagcCCTATAGATAGCCTGTATACTTTCTAAGTATTAGAGAACGTGTTTAATATTATGTTGAGCTTGGCCTGTACTGTATTGAAGACTCCAGGACCAGGTATTGGTAGGAACATCACTTGAAGAGTTCAGGAATTATGAGCACATCACAGCAAGGGGTCCGTCCTAAAtgccactctattccctatgtagtgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1415705 True 5021 TUCP 0.40 3 34337823 34342891
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110489166 LOC106604233 coding downstream 40153 34294193 ~ 34297670 (-)
LOC110489172 LOC106604229 coding downstream 45578 34288581 ~ 34292245 (-)
LOC110487784 LOC106604228 coding downstream 50757 34269309 ~ 34287066 (-)
gnpi gnpi coding downstream 69003 34263847 ~ 34268820 (-)
n4wbp5 n4wbp5 coding downstream 74029 34255786 ~ 34263794 (-)
LOC118938726 NA coding upstream 99449 34441064 ~ 34443131 (-)
LOC110487787 sfxn1 coding upstream 243775 34586666 ~ 34618931 (-)
LOC110489177 pp2aa coding upstream 279739 34622630 ~ 34627670 (-)
ccdc69 LOC106604205 coding upstream 540500 34883391 ~ 34904800 (-)
LOC118938728 NA coding upstream 554785 34897676 ~ 34900540 (-)
G1240395 NA non-coding downstream 7273 34329750 ~ 34330550 (-)
G1240379 NA non-coding downstream 12667 34322720 ~ 34325156 (-)
G1240368 NA non-coding downstream 86966 34250546 ~ 34250857 (-)
G1240363 NA non-coding downstream 114386 34222797 ~ 34223437 (-)
G1240362 NA non-coding downstream 115562 34221064 ~ 34222261 (-)
G1240402 NA non-coding upstream 8076 34350967 ~ 34351178 (-)
G1240406 NA non-coding upstream 16688 34359579 ~ 34359844 (-)
G1240445 NA non-coding upstream 104544 34447435 ~ 34448048 (-)
G1240451 NA non-coding upstream 141388 34484279 ~ 34486122 (-)
G1239090 ogt other downstream 1641421 32695876 ~ 32696402 (-)
LOC110489150 LOC106604256 other downstream 1758876 32577176 ~ 32610818 (-)
G1238363 LOC106612212 other downstream 1907848 32427992 ~ 32429975 (-)
G1238347 NA other downstream 1936923 32400413 ~ 32400900 (-)
G1240533 NA other upstream 298601 34641492 ~ 34642037 (-)
G1240534 NA other upstream 300244 34643135 ~ 34644152 (-)
G1240963 NA other upstream 719032 35061923 ~ 35062319 (-)
G1240953 NA other upstream 764937 35107828 ~ 35125496 (-)
G1241697 NA other upstream 1174886 35517777 ~ 35519330 (-)

Expression

G1240399 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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G1240399 Expression in each Bioproject

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G1240399 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network