Gene
RNA
| Item | Value |
|---|---|
| gene id | G1240508 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 34547859 ~ 34548088 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1415824 | True | 230 | lncRNA | 0.47 | 1 | 34547859 | 34548088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938726 | NA | coding | downstream | 104902 | 34441064 ~ 34443131 (-) |
| LOC110489166 | LOC106604233 | coding | downstream | 250189 | 34294193 ~ 34297670 (-) |
| LOC110489172 | LOC106604229 | coding | downstream | 255614 | 34288581 ~ 34292245 (-) |
| LOC110487784 | LOC106604228 | coding | downstream | 260793 | 34269309 ~ 34287066 (-) |
| gnpi | gnpi | coding | downstream | 279039 | 34263847 ~ 34268820 (-) |
| LOC110487787 | sfxn1 | coding | upstream | 38578 | 34586666 ~ 34618931 (-) |
| LOC110489177 | pp2aa | coding | upstream | 74542 | 34622630 ~ 34627670 (-) |
| ccdc69 | LOC106604205 | coding | upstream | 335303 | 34883391 ~ 34904800 (-) |
| LOC118938728 | NA | coding | upstream | 349588 | 34897676 ~ 34900540 (-) |
| gm2a | sap3 | coding | upstream | 365972 | 34914060 ~ 34921098 (-) |
| G1240505 | NA | non-coding | downstream | 11143 | 34536349 ~ 34536716 (-) |
| G1240503 | NA | non-coding | downstream | 12453 | 34535196 ~ 34535406 (-) |
| G1240491 | NA | non-coding | downstream | 37660 | 34509815 ~ 34510199 (-) |
| G1240490 | NA | non-coding | downstream | 39567 | 34507840 ~ 34508292 (-) |
| G1240487 | NA | non-coding | downstream | 48533 | 34498984 ~ 34499326 (-) |
| G1240515 | NA | non-coding | upstream | 14908 | 34562996 ~ 34563544 (-) |
| G1240533 | NA | non-coding | upstream | 93414 | 34641492 ~ 34642037 (-) |
| G1240535 | NA | non-coding | upstream | 96812 | 34644900 ~ 34645191 (-) |
| G1240537 | NA | non-coding | upstream | 101708 | 34649796 ~ 34650466 (-) |
| G1240539 | LOC106604211 | non-coding | upstream | 105473 | 34653561 ~ 34653889 (-) |
| G1240399 | NA | other | downstream | 204968 | 34337823 ~ 34342891 (-) |
| G1239090 | ogt | other | downstream | 1851457 | 32695876 ~ 32696402 (-) |
| LOC110489150 | LOC106604256 | other | downstream | 1968912 | 32577176 ~ 32610818 (-) |
| G1238363 | LOC106612212 | other | downstream | 2117884 | 32427992 ~ 32429975 (-) |
| G1240534 | NA | other | upstream | 95047 | 34643135 ~ 34644152 (-) |
| G1240963 | NA | other | upstream | 513835 | 35061923 ~ 35062319 (-) |
| G1240953 | NA | other | upstream | 559740 | 35107828 ~ 35125496 (-) |
| G1241697 | NA | other | upstream | 969689 | 35517777 ~ 35519330 (-) |
