Gene
RNA
| Item | Value |
|---|---|
| gene id | G1240533 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 34641492 ~ 34642037 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1415856 | False | 474 | TUCP | 0.55 | 2 | 34641492 | 34642037 |
| TU1415854 | False | 500 | TUCP | 0.57 | 2 | 34641502 | 34642037 |
| TU1415855 | False | 500 | TUCP | 0.57 | 2 | 34641502 | 34642037 |
| TU1415857 | True | 428 | lncRNA | 0.54 | 2 | 34641502 | 34642037 |
34,640,400
34,640,800
34,641,200
34,641,600
34,642,000
34,642,400
34,642,800
34,643,200
34,643,600
34,644,000
34,644,400
34,644,800
34,645,200
34,645,600
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489177 | pp2aa | coding | downstream | 13832 | 34622630 ~ 34627670 (-) |
| LOC110487787 | sfxn1 | coding | downstream | 22571 | 34586666 ~ 34618931 (-) |
| LOC118938726 | NA | coding | downstream | 198545 | 34441064 ~ 34443131 (-) |
| LOC110489166 | LOC106604233 | coding | downstream | 343832 | 34294193 ~ 34297670 (-) |
| LOC110489172 | LOC106604229 | coding | downstream | 349257 | 34288581 ~ 34292245 (-) |
| ccdc69 | LOC106604205 | coding | upstream | 241354 | 34883391 ~ 34904800 (-) |
| LOC118938728 | NA | coding | upstream | 255639 | 34897676 ~ 34900540 (-) |
| gm2a | sap3 | coding | upstream | 272023 | 34914060 ~ 34921098 (-) |
| LOC118938729 | NA | coding | upstream | 383137 | 35025174 ~ 35028163 (-) |
| LOC110489216 | LOC106604190 | coding | upstream | 400054 | 35042091 ~ 35082780 (-) |
| G1240515 | NA | non-coding | downstream | 77958 | 34562996 ~ 34563544 (-) |
| G1240508 | NA | non-coding | downstream | 93414 | 34547859 ~ 34548088 (-) |
| G1240505 | NA | non-coding | downstream | 104786 | 34536349 ~ 34536716 (-) |
| G1240503 | NA | non-coding | downstream | 106096 | 34535196 ~ 34535406 (-) |
| G1240491 | NA | non-coding | downstream | 131303 | 34509815 ~ 34510199 (-) |
| G1240535 | NA | non-coding | upstream | 2863 | 34644900 ~ 34645191 (-) |
| G1240537 | NA | non-coding | upstream | 7759 | 34649796 ~ 34650466 (-) |
| G1240539 | LOC106604211 | non-coding | upstream | 11524 | 34653561 ~ 34653889 (-) |
| G1240541 | LOC106604211 | non-coding | upstream | 12412 | 34654449 ~ 34655184 (-) |
| G1240540 | LOC106604211 | non-coding | upstream | 13475 | 34655512 ~ 34655759 (-) |
| G1240399 | NA | other | downstream | 298611 | 34337823 ~ 34342891 (-) |
| G1239090 | ogt | other | downstream | 1945100 | 32695876 ~ 32696402 (-) |
| LOC110489150 | LOC106604256 | other | downstream | 2062555 | 32577176 ~ 32610818 (-) |
| G1238363 | LOC106612212 | other | downstream | 2211527 | 32427992 ~ 32429975 (-) |
| G1240534 | NA | other | upstream | 1098 | 34643135 ~ 34644152 (-) |
| G1240963 | NA | other | upstream | 419886 | 35061923 ~ 35062319 (-) |
| G1240953 | NA | other | upstream | 465791 | 35107828 ~ 35125496 (-) |
| G1241697 | NA | other | upstream | 875740 | 35517777 ~ 35519330 (-) |
| matr3l1.1 | LOC106604139 | other | upstream | 941274 | 35578460 ~ 35589383 (-) |
