G1240534


Basic Information

Item Value
gene id G1240534
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 34643135 ~ 34644152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1415859
TAGTGCTGGAGACCAGGGACCCTTCACCAGGTAGGGAGAAACTGTCATTCAGACCAGGAGAGaaACCTCAGGTTTGGGTGATCTCTCTCCGTTGGTGTggctctctcctcccaccccagGACTGATCTTCTCGGTCTCTTCCTTGGGGGTGAGGAGCACCGTAGGGCTAGAGGGTCGGGCAGGAGAGGAGCCCTGCAGAGAATCCATGCTCTCTGGAGTTGTCAAGCTGGATACAGGCACTTCTTTCTTGACAGACTTAACCTGTCATAGAAATGAGATAATTAGATCCGTTTCAGAGTGGTACTGTGGCAGTATAGTTGCGTTAATATGGCTGTTGATTAGTTCATTCGGCCTTACCTGAGTGTCCCCGACTTCTgtcttctcctctgtctgtccACTCTGCTTCTTCAACTCCTTCTTCTTTGGAGGACTGAGTGACACTTCTTCTATGGTGCATTCCAGGACCTTGTGAGATGGCTTCCTTGGCCTCTTCCTCTCCAGGGATACTGGGGCTGGGGAATGAACAGACATCTAAATACCACAAATCTACTGTATATGAAAATATGAGGATTTGTTTTCATTATCATAACTACTTTACCAAAATATCTACTTTCCCTACAGAACAACAGTACTCTCCCTATGGAACTCCTCTCACCAATGGAACTCCTCTCACCAATGGAACTCCTCTCACCAATGGAACTCCTCTCACCAATGGAACTCCTCTCACCAATGGAACTCCTCTCACCAATGGAACTGCTCTCACCAATGGAACTGCTCTCACCAATGGAACTGCTCTCACCAATGGAACTGCTCTCACCAATGGAACTCCTCTCACCAATGGAACTGCTCTCACCAATGGAACTCCTCTCACCAATGGAACTACTCTCACCAATGGAACTCCTCTCATCAATGGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1415859 True 916 TUCP 0.48 2 34643135 34644152
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110489177 pp2aa coding downstream 15465 34622630 ~ 34627670 (-)
LOC110487787 sfxn1 coding downstream 24204 34586666 ~ 34618931 (-)
LOC118938726 NA coding downstream 200178 34441064 ~ 34443131 (-)
LOC110489166 LOC106604233 coding downstream 345465 34294193 ~ 34297670 (-)
LOC110489172 LOC106604229 coding downstream 350890 34288581 ~ 34292245 (-)
ccdc69 LOC106604205 coding upstream 239239 34883391 ~ 34904800 (-)
LOC118938728 NA coding upstream 253524 34897676 ~ 34900540 (-)
gm2a sap3 coding upstream 269908 34914060 ~ 34921098 (-)
LOC118938729 NA coding upstream 381022 35025174 ~ 35028163 (-)
LOC110489216 LOC106604190 coding upstream 397939 35042091 ~ 35082780 (-)
G1240533 NA non-coding downstream 1098 34641492 ~ 34642037 (-)
G1240515 NA non-coding downstream 79591 34562996 ~ 34563544 (-)
G1240508 NA non-coding downstream 95047 34547859 ~ 34548088 (-)
G1240505 NA non-coding downstream 106419 34536349 ~ 34536716 (-)
G1240503 NA non-coding downstream 107729 34535196 ~ 34535406 (-)
G1240535 NA non-coding upstream 748 34644900 ~ 34645191 (-)
G1240537 NA non-coding upstream 5644 34649796 ~ 34650466 (-)
G1240539 LOC106604211 non-coding upstream 9409 34653561 ~ 34653889 (-)
G1240541 LOC106604211 non-coding upstream 10297 34654449 ~ 34655184 (-)
G1240540 LOC106604211 non-coding upstream 11360 34655512 ~ 34655759 (-)
G1240399 NA other downstream 300244 34337823 ~ 34342891 (-)
G1239090 ogt other downstream 1946733 32695876 ~ 32696402 (-)
LOC110489150 LOC106604256 other downstream 2064188 32577176 ~ 32610818 (-)
G1240963 NA other upstream 417771 35061923 ~ 35062319 (-)
G1240953 NA other upstream 463676 35107828 ~ 35125496 (-)
G1241697 NA other upstream 873625 35517777 ~ 35519330 (-)
matr3l1.1 LOC106604139 other upstream 939159 35578460 ~ 35589383 (-)
G1242169 NA other upstream 1771826 36415978 ~ 36418075 (-)

Expression

G1240534 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G1240534 Expression in each Bioproject

Bar chart with 16 bars.
G1240534 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network