Gene
RNA
| Item | Value |
|---|---|
| gene id | G1240539 |
| gene name | LOC106604211 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 34653561 ~ 34653889 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1415864 | True | 329 | lncRNA | 0.45 | 1 | 34653561 | 34653889 |
34,652,800
34,653,200
34,653,600
34,654,000
34,654,400
34,654,800
34,654,800
34,655,200
34,655,600
34,656,000
34,656,400
34,656,800
34,657,200
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489177 | pp2aa | coding | downstream | 25891 | 34622630 ~ 34627670 (-) |
| LOC110487787 | sfxn1 | coding | downstream | 34630 | 34586666 ~ 34618931 (-) |
| LOC118938726 | NA | coding | downstream | 210604 | 34441064 ~ 34443131 (-) |
| LOC110489166 | LOC106604233 | coding | downstream | 355891 | 34294193 ~ 34297670 (-) |
| LOC110489172 | LOC106604229 | coding | downstream | 361316 | 34288581 ~ 34292245 (-) |
| ccdc69 | LOC106604205 | coding | upstream | 229502 | 34883391 ~ 34904800 (-) |
| LOC118938728 | NA | coding | upstream | 243787 | 34897676 ~ 34900540 (-) |
| gm2a | sap3 | coding | upstream | 260171 | 34914060 ~ 34921098 (-) |
| LOC118938729 | NA | coding | upstream | 371285 | 35025174 ~ 35028163 (-) |
| LOC110489216 | LOC106604190 | coding | upstream | 388202 | 35042091 ~ 35082780 (-) |
| G1240537 | NA | non-coding | downstream | 3095 | 34649796 ~ 34650466 (-) |
| G1240535 | NA | non-coding | downstream | 8370 | 34644900 ~ 34645191 (-) |
| G1240533 | NA | non-coding | downstream | 11524 | 34641492 ~ 34642037 (-) |
| G1240515 | NA | non-coding | downstream | 90017 | 34562996 ~ 34563544 (-) |
| G1240508 | NA | non-coding | downstream | 105473 | 34547859 ~ 34548088 (-) |
| G1240541 | LOC106604211 | non-coding | upstream | 560 | 34654449 ~ 34655184 (-) |
| G1240540 | LOC106604211 | non-coding | upstream | 1623 | 34655512 ~ 34655759 (-) |
| G1240544 | NA | non-coding | upstream | 3883 | 34657772 ~ 34702146 (-) |
| G1240545 | NA | non-coding | upstream | 25857 | 34679746 ~ 34681672 (-) |
| G1240550 | NA | non-coding | upstream | 34899 | 34688788 ~ 34689622 (-) |
| G1240534 | NA | other | downstream | 9409 | 34643135 ~ 34644152 (-) |
| G1240399 | NA | other | downstream | 310670 | 34337823 ~ 34342891 (-) |
| G1239090 | ogt | other | downstream | 1957159 | 32695876 ~ 32696402 (-) |
| G1240963 | NA | other | upstream | 408034 | 35061923 ~ 35062319 (-) |
| G1240953 | NA | other | upstream | 453939 | 35107828 ~ 35125496 (-) |
| G1241697 | NA | other | upstream | 863888 | 35517777 ~ 35519330 (-) |
| matr3l1.1 | LOC106604139 | other | upstream | 929422 | 35578460 ~ 35589383 (-) |
| G1242169 | NA | other | upstream | 1762089 | 36415978 ~ 36418075 (-) |
