Gene
RNA
| Item | Value |
|---|---|
| gene id | G1240622 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 34814560 ~ 34815916 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1415956 | True | 1279 | lncRNA | 0.41 | 3 | 34814560 | 34815916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489177 | pp2aa | coding | downstream | 186890 | 34622630 ~ 34627670 (-) |
| LOC110487787 | sfxn1 | coding | downstream | 195629 | 34586666 ~ 34618931 (-) |
| LOC118938726 | NA | coding | downstream | 371603 | 34441064 ~ 34443131 (-) |
| LOC110489166 | LOC106604233 | coding | downstream | 516890 | 34294193 ~ 34297670 (-) |
| LOC110489172 | LOC106604229 | coding | downstream | 522315 | 34288581 ~ 34292245 (-) |
| ccdc69 | LOC106604205 | coding | upstream | 67475 | 34883391 ~ 34904800 (-) |
| LOC118938728 | NA | coding | upstream | 81760 | 34897676 ~ 34900540 (-) |
| gm2a | sap3 | coding | upstream | 98144 | 34914060 ~ 34921098 (-) |
| LOC118938729 | NA | coding | upstream | 209258 | 35025174 ~ 35028163 (-) |
| LOC110489216 | LOC106604190 | coding | upstream | 226175 | 35042091 ~ 35082780 (-) |
| G1240595 | NA | non-coding | downstream | 37652 | 34776322 ~ 34776908 (-) |
| G1240563 | NA | non-coding | downstream | 41348 | 34771658 ~ 34773212 (-) |
| G1240562 | tmed9 | non-coding | downstream | 46696 | 34762530 ~ 34767864 (-) |
| G1240589 | LOC106612240 | non-coding | downstream | 55539 | 34757819 ~ 34759021 (-) |
| G1240585 | NA | non-coding | downstream | 64662 | 34748556 ~ 34749898 (-) |
| G1240642 | NA | non-coding | upstream | 41820 | 34857736 ~ 34858195 (-) |
| G1240679 | NA | non-coding | upstream | 46978 | 34862894 ~ 34865697 (-) |
| G1240706 | NA | non-coding | upstream | 91167 | 34907083 ~ 34907282 (-) |
| G1240713 | NA | non-coding | upstream | 110191 | 34926107 ~ 34926377 (-) |
| G1240534 | NA | other | downstream | 170408 | 34643135 ~ 34644152 (-) |
| G1240533 | NA | other | downstream | 172523 | 34641492 ~ 34642037 (-) |
| G1240399 | NA | other | downstream | 471669 | 34337823 ~ 34342891 (-) |
| G1239090 | ogt | other | downstream | 2118158 | 32695876 ~ 32696402 (-) |
| G1240963 | NA | other | upstream | 246007 | 35061923 ~ 35062319 (-) |
| G1240953 | NA | other | upstream | 291912 | 35107828 ~ 35125496 (-) |
| G1241697 | NA | other | upstream | 701861 | 35517777 ~ 35519330 (-) |
| matr3l1.1 | LOC106604139 | other | upstream | 767395 | 35578460 ~ 35589383 (-) |
| G1242169 | NA | other | upstream | 1600062 | 36415978 ~ 36418075 (-) |
