G1240953


Basic Information

Item Value
gene id G1240953
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 35107828 ~ 35125496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1416333
GGACATTTCAGATCATTTTTATTTGAGGAAATAATTCTATTGTGTTCACACGGTATCAAAAAAAAAAGAGTATAAGGAACGTCAGTAAACATGCTACGGTATAGTGTGAGGAAAAAAACGCTCAACCTGCAAGATGCTTTCCTCGTAGAGTTTAAACAATATTTCCTTTTTATTGTCTCAATCATTTTTCAGTACACTTATGCCCTTGTTGTGTGACAGAATCTATGTCAGAAAACCCACCTGTGGATAGTCAGGCCTTAATTTAAAGCAGTAGTCAAAGTCAGTGAACTAACAAACAAAAGAACAGAGATAACAAAAGGAGTCCACCACCAAAAGAGTGAAAACAACTAAATATGTTTAAAAAGCGAAAGGagcatttatttagaatttatttGATTTTTACAAATTTGTCTCCTTCAAAATAATTTTCAAATTGAAGTTATTAAATCACAGCCCTGATtaaagtgagaaaaaaaagatAAATGTTGTGATTAACATCCATTATCACAACCTGTTCAACATACATTTATATCTCCCTCTCGTCACAAGTCTCTCTCTGTTACTAAtctatctgttttttttttaaaatgcttATTTCTTTGCCCAAAAACAAGCCAAATTTGAAGTTGCATCATGCTGACGTTTTGTGATTGTTAGTTCAGACGGTGCacatctctttttttttcttcatcaatgtTAGTGGTATAGGAGGTCGTTAATTAGTTACAGTTAGCACCGTTACAGTGTTCCTTTAACTTAGGGATCAGCTTAGCACCTCGTCCCAATAGAGACTAGTTTTCATACTGGAGGTCAGCGGGGTGAGTTTAGATGACAAGGTCCTTGTTGACATCCGCTCCTTGATACTGAAGCagttggcccactcctccagggCGATGTACTTGTCATTGTCAGCGTCGCACTGCTCGAAGAAACGAGTGGTGCAGTGCTCCATGGGGATGAGAGGGGCGCGCAGGGGGGCCAGCTCTGTGTGGGACAGGAACCTACAACACCACAGAAAACATGTTACGAAGCATCTATGTAGGCCTTGTAAAGGATTTATAACGGCTTTATGAAGACTTTCTAAGCTATAGTTTTAGACCATAGAAAACCCATACGATCCTTTAAATAGTCAGCATTATGAAGAACGTAGCATTGTCAGTTGCTTTTTTGCTCATAAAACAATAGATTCAGGCATGCTGCCAATATCCTTTCTGAAACATTGTagaaatgtttcattatttatgtcCTGACCGGTACCGAGTTGAATCAAAGTTATAGCCCAAGCAAGCCTGTATTTGTGTGATGTTGAAACAATCCAGCTGAAGCAGAAGTCAGGaaactcttcttcttctcctcaacCTACCCATCGACGGGGTGCTGGTCCAGCTGACCGAACTGCCAGTGGACGGGGAAAatgtacatgttgtagttcttcTCAAAGTCGTGGGCCAGCAGGTCCAGGGAGTGCTCTCCAGCCTGCAGTCTCTTCTCGTTCTCGTAGATCTTCTTCACCTGTCTGAGCATCTGCTTCTCAGTCAGGAGGTTGTTCTCCTCATCGCGCTCGTACAGGCTGACCAGAACGTTCTTCAGCCAGTCCCTCATACGCAGGGGGAACTCATTCAGCTCAGCATCCATGCAGGCCTCGATGACTGGAGAATAAAATTTGCATGGCCCGATGTAGTCTAGGTGCAGCTTGTGGCCCTTCTTGGTTCCCTCCAGACTGCACTTCTGGGCAAAGAAGTGGCAGGAAGAGTCGTAGGTTGTATTGTCTGTGGCGCAAACATGCTCAAACTCTTCAATGGCAGCAGGGCAGGTAGTGGGGTCCTGGCAGACACACATGGGGGTGTTCTCCTCATCGACCTCACACACCTTTCCCTTCTTGCAGTGGTGGTTCAAACAGGGGTTCTCAGCgatgtcctcttcctcctccacaacATCAATGGCCTCGTCAAAGTCTCCAATCTCTACCTGCACTGGGTTGGCTCccacttctggctgtgcCTCCTCAACGACATCATCAATGATGGGCTCCTCCTCCGTAATGGAAGCGGTGAACACCTGGCCAGCTAGGCACAGGAGGAAGACGATACACACCCTCATCGTTCAGtCTTCAGAACACCAACAagcagaagagacagaagagaagtCAGCTGTGCAGAGGCTCCTGG

Function

NR:

description
SPARC-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1416333 True 2168 TUCP 0.44 10 35107828 35125496
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110489216 LOC106604190 coding downstream 25048 35042091 ~ 35082780 (-)
LOC118938729 NA coding downstream 79665 35025174 ~ 35028163 (-)
gm2a sap3 coding downstream 186730 34914060 ~ 34921098 (-)
ccdc69 LOC106604205 coding downstream 203028 34883391 ~ 34904800 (-)
LOC118938728 NA coding downstream 207288 34897676 ~ 34900540 (-)
glra1 glra1 coding upstream 33119 35158615 ~ 35267880 (-)
thoc3 LOC106604138 coding upstream 409820 35535316 ~ 35538759 (-)
shtn3 LOC106612280 coding upstream 414190 35539686 ~ 35566407 (-)
si:rp71-1d10.5 tmm80 coding upstream 441313 35566809 ~ 35571846 (-)
matr3l1.1 LOC106604139 coding upstream 452964 35578460 ~ 35589383 (-)
G1240973 NA non-coding downstream 14764 35091956 ~ 35093064 (-)
G1240957 NA non-coding downstream 70616 35036565 ~ 35037212 (-)
G1240833 NA non-coding downstream 73009 35034488 ~ 35034819 (-)
G1240829 NA non-coding downstream 78207 35029324 ~ 35029621 (-)
G1240785 NA non-coding downstream 143035 34963913 ~ 34964793 (-)
G1240987 NA non-coding upstream 1520 35127016 ~ 35127300 (-)
G1240971 LOC106604193 non-coding upstream 10982 35136478 ~ 35143093 (-)
G1240997 NA non-coding upstream 27311 35152807 ~ 35153283 (-)
G1240998 NA non-coding upstream 27859 35153355 ~ 35154076 (-)
G1241014 NA non-coding upstream 51887 35177383 ~ 35178684 (-)
G1240963 NA other downstream 45509 35061923 ~ 35062319 (-)
G1240534 NA other downstream 463676 34643135 ~ 34644152 (-)
G1240533 NA other downstream 465791 34641492 ~ 34642037 (-)
G1240399 NA other downstream 764937 34337823 ~ 34342891 (-)
LOC110489172 LOC106604229 other downstream 815658 34288581 ~ 34292245 (-)
G1241697 NA other upstream 392281 35517777 ~ 35519330 (-)
G1242169 NA other upstream 1290482 36415978 ~ 36418075 (-)
G1243234 NA other upstream 2320273 37445769 ~ 37446210 (-)
G1243718 NA other upstream 2647135 37772631 ~ 37773270 (-)

Expression

G1240953 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 50.
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G1240953 Expression in each Bioproject

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G1240953 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network