G1243229


Basic Information

Item Value
gene id G1243229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 37434139 ~ 37435120 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1419004
GGTGGTTTTTACAGGGGAAGGTCATGTAGAAAATGAGTAGGTTCCTATTAGGTGGGAAAGATAATGTTGAAAATGAATAGGCTGTTATTATGTGGGGGAGATAATGTAGAAAATGAGTAGGTTCCTATTAGGTGGGGGGAGATAATGTAGAACATGAGTAGGTTCCCATTAGGCGGGGAAGATAATGTAGAAAATGAGCAGGTTCCCATTAGGTGGGGAAGATAATGTAGAAAATGAGTAGGTTCCTATTAGGTGGGTAAGATAATGTAGAAAATGAGTAGGTTTGCAATAGAGGGCAGGGAAAGGGGTGTCAAAGGCATCGTAACTCGCCATACAAGAAACATCTGAAGAGAAACAGTGTTGGGCATATCATGGGGGATGGCCCTGTACTGCATGTTTATATAAAGTGTTCGCACGACACAGAGTGACATTTTCTTTTGTCCATTGAGTCTTAGGTATGTGTCTGCAGACCCCTGAACAAGACGGGATTCAATAAACATATTCAGACGAGAGCAAAAAGTAACTTGGATCATCAGTTGGAGCTGGAGCTGAATGTCTTGCTGGATACACTAAGCAATATTTCACCAGAGATTGGGCATATACAACATTCAACTTGGGTTCACAAAGCTATACTGTGTGTTTGCGTTTCGTTTATCGTTAAgtaaagtgtgtgtttgtgtggttccAATACGCATAGGTGGTCAAAATTATTTTTGATTACTGATCAGCAAAAATCTCTACCAAACAAAAATTGTTTCTGTTGTGGATCTACTTTGGTATAGGACTACcatttatatgattacagacgTTGTCAGATTCACTTCTGTGCAACATTGTGGAGACTGAGGAACAACATTGTGGAGACTGAGGAACAACATTGTGGAGAGTGAGGAACAACAGTGTGGAGAGTGAGGAACAACATTGTGGAGAGTGAGGAACAACAGTGTGGAGAGTGAGGAACAACATTGTGGAGACTGAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1419004 True 982 lncRNA 0.41 1 37434139 37435120

Neighbor

gene id symbol gene type direction distance location
LOC110510782 mid2 coding downstream 1054877 36145477 ~ 36379262 (-)
LOC110489193 peam3 coding downstream 1360037 36043082 ~ 36074102 (-)
LOC110489191 LOC106604152 coding downstream 1456372 35943307 ~ 35977767 (-)
LOC100305133 LOC106604149 coding downstream 1496827 35895251 ~ 35937312 (-)
gpr137 g137a coding downstream 1553903 35868806 ~ 35880236 (-)
LOC110489226 LOC106604165 coding upstream 206734 37641854 ~ 37688173 (-)
LOC110489227 NA coding upstream 265700 37700820 ~ 37745238 (-)
LOC110489228 ef-1g coding upstream 348182 37783302 ~ 37802457 (-)
LOC118938777 NA coding upstream 364952 37800072 ~ 37800148 (-)
rpb7 rpb7 coding upstream 368468 37803588 ~ 37810500 (-)
G1243149 NA non-coding downstream 115058 37315899 ~ 37319081 (-)
G1243117 NA non-coding downstream 179192 37252967 ~ 37254947 (-)
G1243082 NA non-coding downstream 229045 37202728 ~ 37205094 (-)
G1243066 NA non-coding downstream 262339 37171225 ~ 37171800 (-)
G1242824 NA non-coding downstream 327034 37106711 ~ 37107105 (-)
G1243228 NA non-coding upstream 2802 37437922 ~ 37441940 (-)
G1243230 NA non-coding upstream 7032 37442152 ~ 37442622 (-)
G1243261 NA non-coding upstream 41948 37477068 ~ 37477315 (-)
G1243264 LOC106581475 non-coding upstream 42291 37477411 ~ 37477702 (-)
G1243273 NA non-coding upstream 49903 37485023 ~ 37485235 (-)
G1242169 NA other downstream 1016064 36415978 ~ 36418075 (-)
matr3l1.1 LOC106604139 other downstream 1845146 35578460 ~ 35589383 (-)
G1241697 NA other downstream 1914809 35517777 ~ 35519330 (-)
G1240953 NA other downstream 2308643 35107828 ~ 35125496 (-)
G1240963 NA other downstream 2371820 35061923 ~ 35062319 (-)
G1243234 NA other upstream 10649 37445769 ~ 37446210 (-)
G1243718 NA other upstream 337511 37772631 ~ 37773270 (-)
G1244197 NA other upstream 1065567 38500687 ~ 38500999 (-)
G1244755 LOC106604128 other upstream 1414526 38824503 ~ 38852543 (-)
G1244972 rnf44 other upstream 1850534 39285654 ~ 39298246 (-)

Expression

G1243229 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G1243229 Expression in each Bioproject

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G1243229 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 14.
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Co-expression Network