Gene
RNA
| Item | Value |
|---|---|
| gene id | G1244482 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 39096726 ~ 39096973 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107731576 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1420537 | True | 248 | lncRNA | 0.43 | 1 | 39096726 | 39096973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489232 | LOC106604128 | coding | upstream | 244417 | 38847546 ~ 38852309 (+) |
| LOC110489230 | LOC106604157 | coding | upstream | 1110026 | 37938126 ~ 37986700 (+) |
| LOC118938732 | NA | coding | upstream | 1151745 | 37941488 ~ 37944981 (+) |
| LOC118938765 | NA | coding | upstream | 1176712 | 37919553 ~ 37920014 (+) |
| LOC110489229 | LOC106604160 | coding | upstream | 1254631 | 37825072 ~ 37842095 (+) |
| LOC110489247 | syub | coding | downstream | 36867 | 39133840 ~ 39170279 (+) |
| LOC110487796 | LOC106612310 | coding | downstream | 177694 | 39274667 ~ 39319184 (+) |
| LOC110489250 | higd2a | coding | downstream | 239677 | 39336650 ~ 39338684 (+) |
| LOC110487794 | LOC104930052 | coding | downstream | 277998 | 39374971 ~ 39446062 (+) |
| LOC110489244 | LOC106594455 | coding | downstream | 1654908 | 40751881 ~ 40757026 (+) |
| G1244481 | NA | non-coding | upstream | 2164 | 39094361 ~ 39094562 (+) |
| G1244479 | NA | non-coding | upstream | 8663 | 39087737 ~ 39088063 (+) |
| G1244478 | NA | non-coding | upstream | 13674 | 39081051 ~ 39083052 (+) |
| G1244477 | NA | non-coding | upstream | 16654 | 39074004 ~ 39080072 (+) |
| G1244467 | NA | non-coding | upstream | 46539 | 39049325 ~ 39050187 (+) |
| G1244485 | NA | non-coding | downstream | 5213 | 39102186 ~ 39102478 (+) |
| G1244486 | LOC100846954 | non-coding | downstream | 6677 | 39103650 ~ 39103911 (+) |
| G1244495 | NA | non-coding | downstream | 25010 | 39121983 ~ 39122906 (+) |
| G1244497 | NA | non-coding | downstream | 30435 | 39127408 ~ 39129880 (+) |
| G1244498 | NA | non-coding | downstream | 38932 | 39135905 ~ 39136568 (+) |
| G1244238 | NA | other | upstream | 502112 | 38593754 ~ 38594614 (+) |
| G1243244 | NA | other | upstream | 1642243 | 37453116 ~ 37454483 (+) |
| G1242575 | NA | other | upstream | 2196377 | 36899842 ~ 36900349 (+) |
| G1242376 | NA | other | upstream | 2430007 | 36666003 ~ 36666719 (+) |
| G1241466 | NA | other | upstream | 3063556 | 36026098 ~ 36033170 (+) |
| G1244545 | cdhr2 | other | downstream | 132057 | 39229030 ~ 39234285 (+) |
| G1244560 | NA | other | downstream | 245121 | 39335475 ~ 39343080 (+) |
| G1245154 | NA | other | downstream | 637323 | 39734296 ~ 39734843 (+) |
| G1246017 | NA | other | downstream | 1564249 | 40661222 ~ 40661564 (+) |
