Gene
RNA
| Item | Value |
|---|---|
| gene id | G1246470 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 41312357 ~ 41313231 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vascular endothelial growth factor receptor 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1423032 | False | 810 | lncRNA | 0.54 | 3 | 41312357 | 41313231 |
| TU1423033 | True | 662 | lncRNA | 0.54 | 2 | 41312357 | 41313231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938767 | NA | coding | downstream | 260042 | 41050692 ~ 41052315 (-) |
| LOC118938734 | LOC106604122 | coding | downstream | 326655 | 40976712 ~ 40985775 (-) |
| LOC110489236 | prelid1 | coding | downstream | 341908 | 40950986 ~ 40970449 (-) |
| LOC110489235 | fam193b | coding | downstream | 385623 | 40861900 ~ 40926734 (-) |
| LOC110489243 | ddx41 | coding | downstream | 461878 | 40813484 ~ 40850479 (-) |
| LOC110487959 | ergic1 | coding | upstream | 4432 | 41317663 ~ 41358875 (-) |
| LOC110487966 | isk1 | coding | upstream | 236056 | 41549287 ~ 41551540 (-) |
| LOC110487963 | LOC106604100 | coding | upstream | 315167 | 41628398 ~ 41655871 (-) |
| LOC110524910 | LOC106604098 | coding | upstream | 366868 | 41680099 ~ 41709893 (-) |
| LOC118938737 | NA | coding | upstream | 513404 | 41826635 ~ 41827086 (-) |
| G1246438 | NA | non-coding | downstream | 120986 | 41190851 ~ 41191371 (-) |
| G1246435 | NA | non-coding | downstream | 127774 | 41183044 ~ 41184583 (-) |
| G1246431 | NA | non-coding | downstream | 140165 | 41171614 ~ 41172192 (-) |
| G1246430 | NA | non-coding | downstream | 141861 | 41169635 ~ 41170496 (-) |
| G1246392 | NA | non-coding | downstream | 247122 | 41064722 ~ 41065235 (-) |
| G1246510 | NA | non-coding | upstream | 1909 | 41315140 ~ 41339690 (-) |
| G1246514 | NA | non-coding | upstream | 15862 | 41329093 ~ 41329500 (-) |
| G1246515 | NA | non-coding | upstream | 26502 | 41339733 ~ 41340167 (-) |
| G1246529 | NA | non-coding | upstream | 61212 | 41372866 ~ 41376661 (-) |
| G1246531 | NA | non-coding | upstream | 63803 | 41377034 ~ 41379594 (-) |
| G1246175 | NA | other | downstream | 377790 | 40933172 ~ 40934567 (-) |
| G1246044 | NA | other | downstream | 564779 | 40745525 ~ 40747578 (-) |
| G1246021 | NA | other | downstream | 642786 | 40668575 ~ 40669571 (-) |
| G1245005 | NA | other | downstream | 1887792 | 39422859 ~ 39424565 (-) |
| G1246806 | NA | other | upstream | 299896 | 41613127 ~ 41613833 (-) |
| G1247036 | NA | other | upstream | 797482 | 42110713 ~ 42111119 (-) |
| G1247239 | NA | other | upstream | 981296 | 42294527 ~ 42297572 (-) |
