Gene
RNA
| Item | Value |
|---|---|
| gene id | G1246598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 41537862 ~ 41538794 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1423216 | True | 267 | lncRNA | 0.39 | 2 | 41537862 | 41538794 |
41,536,400
41,536,800
41,537,200
41,537,600
41,538,000
41,538,400
41,538,800
41,539,200
41,539,200
41,539,600
41,540,000
41,540,400
41,540,800
41,541,200
41,541,600
41,542,000
NC_048578.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| neurl1b | neurl1b | coding | upstream | 33255 | 41478639 ~ 41504607 (+) |
| LOC110487960 | LOC106604105 | coding | upstream | 161856 | 41369616 ~ 41376006 (+) |
| LOC110487799 | LOC106591130 | coding | upstream | 224578 | 41058075 ~ 41313284 (+) |
| LOC110489244 | LOC106594455 | coding | upstream | 783798 | 40751881 ~ 40757026 (+) |
| LOC110487794 | LOC104930052 | coding | upstream | 2091800 | 39374971 ~ 39446062 (+) |
| LOC118938735 | LOC106604103 | coding | downstream | 46273 | 41585067 ~ 41590216 (+) |
| LOC110487965 | LOC106604102 | coding | downstream | 60487 | 41599281 ~ 41602756 (+) |
| LOC110487964 | LOC106604101 | coding | downstream | 74262 | 41613056 ~ 41626307 (+) |
| LOC110487800 | LOC106604099 | coding | downstream | 186536 | 41725330 ~ 41830078 (+) |
| LOC110533244 | LOC106604078 | coding | downstream | 553093 | 42091887 ~ 42105699 (+) |
| G1246569 | NA | non-coding | upstream | 84768 | 41452889 ~ 41453094 (+) |
| G1246568 | NA | non-coding | upstream | 85793 | 41451814 ~ 41452069 (+) |
| G1246563 | NA | non-coding | upstream | 122718 | 41414895 ~ 41415144 (+) |
| G1246556 | NA | non-coding | upstream | 129388 | 41408198 ~ 41408474 (+) |
| G1246599 | NA | non-coding | downstream | 214 | 41539008 ~ 41540232 (+) |
| G1246600 | NA | non-coding | downstream | 2618 | 41541412 ~ 41541760 (+) |
| G1246635 | NA | non-coding | downstream | 89860 | 41628654 ~ 41629276 (+) |
| G1246644 | LOC106604100 | non-coding | downstream | 109260 | 41648054 ~ 41648770 (+) |
| G1246647 | NA | non-coding | downstream | 112611 | 41651405 ~ 41652546 (+) |
| G1246102 | NA | other | upstream | 649353 | 40878741 ~ 40888509 (+) |
| G1246103 | NA | other | upstream | 651311 | 40880016 ~ 40886551 (+) |
| G1246017 | NA | other | upstream | 876298 | 40661222 ~ 40661564 (+) |
| LOC110489238 | LOC106604092 | other | downstream | 829668 | 42368435 ~ 42377369 (+) |
| LOC110519852 | LOC106604089 | other | downstream | 905781 | 42444535 ~ 42493206 (+) |
| LOC110514351 | hdx | other | downstream | 1354241 | 42873811 ~ 42922578 (+) |
| hmgn6 | NA | other | downstream | 1515776 | 43054499 ~ 43062453 (+) |
