Gene
RNA
| Item | Value |
|---|---|
| gene id | G1247328 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 42437711 ~ 42493195 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106588004 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1424356 | False | 2515 | lncRNA | 0.41 | 8 | 42437711 | 42493195 |
| TU1424331 | False | 3088 | TUCP | 0.42 | 7 | 42489426 | 42493195 |
| TU1424335 | False | 3368 | TUCP | 0.42 | 6 | 42489426 | 42493195 |
| TU1424340 | False | 2645 | TUCP | 0.41 | 8 | 42489426 | 42493195 |
| TU1424348 | False | 2523 | TUCP | 0.41 | 6 | 42489426 | 42493195 |
| TU1424351 | False | 2848 | TUCP | 0.42 | 9 | 42489426 | 42493195 |
| TU1424354 | False | 2327 | lncRNA | 0.41 | 6 | 42489426 | 42493195 |
| TU1424357 | False | 2409 | lncRNA | 0.41 | 7 | 42489426 | 42493195 |
| TU1424359 | False | 2435 | lncRNA | 0.41 | 9 | 42489426 | 42493195 |
| TU1424360 | False | 2532 | TUCP | 0.41 | 9 | 42489426 | 42493195 |
| TU1424361 | False | 2500 | TUCP | 0.42 | 9 | 42489426 | 42493195 |
| TU1424364 | False | 2483 | TUCP | 0.41 | 10 | 42489426 | 42493195 |
| TU1424365 | True | 2756 | lncRNA | 0.42 | 11 | 42489426 | 42493195 |
42,400,000
42,410,000
42,420,000
42,430,000
42,440,000
42,450,000
42,450,000
42,460,000
42,470,000
42,480,000
42,490,000
42,500,000
42,510,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-153b23.4 | LOC106604090 | coding | downstream | 5244 | 42417293 ~ 42432467 (-) |
| zdhhc15b | zdhhc15 | coding | downstream | 303375 | 42112241 ~ 42134336 (-) |
| LOC118938742 | NA | coding | downstream | 344912 | 42092137 ~ 42092799 (-) |
| LOC110533243 | abcb7 | coding | downstream | 345869 | 42040910 ~ 42091842 (-) |
| LOC118938768 | fgf16 | coding | downstream | 509826 | 41918382 ~ 41927885 (-) |
| sybl1 | vamp7 | coding | upstream | 144064 | 42637259 ~ 42647703 (-) |
| LOC110533235 | LOC106604082 | coding | upstream | 199643 | 42692838 ~ 42737374 (-) |
| LOC118938745 | NA | coding | upstream | 521880 | 43015075 ~ 43015791 (-) |
| gpr174 | LOC106604072 | coding | upstream | 628637 | 43120519 ~ 43160325 (-) |
| p2ry10 | LOC106604073 | coding | upstream | 734697 | 43225623 ~ 43233200 (-) |
| G1247308 | NA | non-coding | downstream | 2510 | 42434702 ~ 42435201 (-) |
| G1247307 | NA | non-coding | downstream | 4164 | 42432815 ~ 42433547 (-) |
| G1247294 | NA | non-coding | downstream | 26279 | 42411210 ~ 42411432 (-) |
| G1247273 | NA | non-coding | downstream | 59044 | 42376833 ~ 42378667 (-) |
| G1247251 | NA | non-coding | downstream | 70421 | 42366882 ~ 42367290 (-) |
| G1247366 | NA | non-coding | upstream | 9185 | 42502380 ~ 42502623 (-) |
| G1247726 | NA | non-coding | upstream | 72772 | 42565967 ~ 42566417 (-) |
| G1247729 | NA | non-coding | upstream | 79341 | 42572536 ~ 42877907 (-) |
| G1247741 | NA | non-coding | upstream | 103851 | 42597046 ~ 42597983 (-) |
| G1247742 | NA | non-coding | upstream | 104299 | 42597494 ~ 42601072 (-) |
| G1247271 | LOC106604092 | other | downstream | 28476 | 42372815 ~ 42409235 (-) |
| G1247239 | NA | other | downstream | 140139 | 42294527 ~ 42297572 (-) |
| G1247036 | NA | other | downstream | 326592 | 42110713 ~ 42111119 (-) |
| G1246806 | NA | other | downstream | 823878 | 41613127 ~ 41613833 (-) |
| G1246531 | NA | other | downstream | 1058117 | 41377034 ~ 41379594 (-) |
| G1247712 | LOC106604087 | other | upstream | 57251 | 42550446 ~ 42613045 (-) |
| G1247806 | NA | other | upstream | 290654 | 42783849 ~ 42853247 (-) |
| G1247813 | NA | other | upstream | 308847 | 42802042 ~ 42808717 (-) |
| G1247342 | NA | non-coding | downstream | 6103 | 42462097 ~ 42483323 (-) |
