hhatlb (hhatl)


Basic Information

Item Value
gene id hhatlb
gene name hhatl
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 1054963 ~ 1101022 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945627.1
cagACGCACCTTTAATTTTTGTCCGCTTCCTCCCCGGGAGTCAGTGGTCCCGCGCGCCGACCACACCACTGGACCGATAACAACACTGCAGATGCACGAGACTGCTTTCTTTCCCCACCTTCATTTTCCATTTGGTCTTTTTATTTAGTTTTAAGGGGGATTGCATTTACTTTGTTGACTTGTTTGGGGTTACAGCTACTTTGCCTCCTCAAGGTCCCTTCTGAGTGGAGGGTGTCTGTCCCTACCCACCAGGTTCTGAGTGTGTGGGTTCCACCAGCTGATCGGTCACCATGGGGATCAAGGCAGCCCTGCCCAGATATGAGCTGTACTTCTATAACACAGTGGTCTATCTGGGCTTGTTGTGGGCTGCCAGCTGGATCTTTGATGTGTCCAGCTCGAATGCAAACAGAAAGACGTTCAAGTCCAGCGTGACACCAGGATGGTACTACTTCGGCAGGAGGATGGATACGGCTGACTTTGAGTGGGTGATGTGGTTCTCTACGTTCCGGGACCACATCCTCTTCGCCCTGTCTGGTCATGTGATCTTCGCTAAGATCTGCTCCATGCTGGCTCCACAGcATAGGAGCCTGATGTACCTGTGTTACGGTACCCTGGCGGTGCTGGTCACTATGGGTTGGACCTACACCACTCTGATCCTGTCCCACTGTGTGCTGCTCTACAGTATTTCTCTGGTTAAACTGCGCTGGCTCTGCTTCCTAGCTGGACTCACCACCCTGTCCACATTCAAGATGGAACCATTCATATCCTGGCAGgCTGGTTTTGTGGCGGGGGATTTTGAGCTCCGTTCCGTCCTGTTCTACGGCGGTTGTGGGTTCACCATCATGCGCTGTATGAGTTTTGCTCTGGAGAACTGTGAGAAGAAAGAAGGAAACTACAGCATCCTGGAACTCCTCAAGTACAACTTCTACCTGCCCTTCTTCTACTTCGGACCAATTATGACCTTCGACAAGTTCTACGCTCAGGCCAACAAGGCTGACCTGACCCGTCAGGAGGGGGCGATATGGAACATATCTCTGCAGGGACTCATTCACCTGGGGGCCATATTAACAGTGGACATCCTCTTCCACTTCCTGTACATCCTGAGCATCCCCACGGACATGAAGCTGCTCAAACACATGTCTGACTGGGctgtagttggtctGGCCTACTGTAACCTGGTGTATGACTGGGTGAAGGCAGCGGTGATGTTTGGGGTGATCAACACTGTGTCTAGACTGGATCATCTGGACCCTCCTCAACCTCCAAAATGTATCACAATGCTCTACGTCTTCTCTGAGACACACTTTGATAGAGGAATAAATGACTGGCTGTGCAAgtatGTGTATAACTACCTGGGAGGGAAGCATGACACTGTGTGGGATGAGACCATTGCTACACTGTGTACTTTTGGCATCACTGTGCTGTGGCTGGGACCCTGTCAGGTGGTGTTCATCTGGGCCTTCTTCAACTGCTTCGGACTCAACTTCGAGCTCTGGACTGCCAAGTTTGTCTGCATGGAACCCTTTGCTTCTCTAGAGATGGCGATGTCTCCTGCCATGTCTCGTAGGATCAGAGCTGTGTTCAACACCTTTAACTTCTGGACCATCGTCCTCTACAACGTCATCGCTCTCAACAGCCTGGAGTTCACTAAGCTGGTCGCCAGGAGACTGCTGCTTAAAGGCTtccccatcaccaccatcactgtCTTCATAGTGACCTATTGTCTTGTCCAGCTcatcaaggagagagagagaagacaggctctGATCGATGACCCCGACCCCATCCCTCCCCCCGCCCCCGTCCCTCCCCCCGCCCCCACAACAGTCACATCCACAGCCCCCATTCAGCCGGTGGTGGACCCCAGCAAGGAGAAAGCAGAGTAGTGATTGGAGGGTGACATTGTCTGTCAAAGTCCCAAATGTCTTTATGAGTCATGGTTTCCTCTGTGTCATCATGGAGATGGTGAGGCTACAGTTAATCGACCAGGTATATTTAGAAGTTCTTCATAGCAATAAAATCTATTGAGCAGCAATATCTATCTACTGTAATATCGACAAAGAGCAATATCTAAGAATTCTACTCAGTCTACTGCCAAAAACACGTTGAGAGTGCTGTCATCAATATAGATTTTCTACAATGTTTTAATCAGAAGTTGTTTCATTGCTAATCATGTAAAACTGCCTTTATTGTAATTAAATCCTCTAAGTGATGCTAAAA
>XM_036945628.1
cagACGCACCTTTAATTTTTGTCCGCTTCCTCCCCGGGAGTCAGTGGTCCCGCGCGCCGACCACACCACTGGACCGATAACAACACTGCAGATGCACGAGACTGCTTTCTTTCCCCACCTTCATTTTCCATTTGGTCTTTTTATTTAGTTTTAAGGGGGATTGCATTTACTTTGTTGACTTGTTTGGGGTTACAGCTACTTTGCCTCCTCAAGGTCCCTTCTGAGTGGAGGGTGTCTGTCCCTACCCACCAGGTTCTGAGTGTGTGGGTTCCACCAGCTGATCGGTCACCATGGGGATCAAGGCAGCCCTGCCCAGATATGAGCTGTACTTCTATAACACAGTGGTCTATCTGGGCTTGTTGTGGGCTGCCAGCTGGATCTTTGATGTGTCCAGCTCGAATGCAAACAGAAAGACGTTCAAGTCCAGCGTGACACCAGGATGGTACTACTTCGGCAGGAGGATGGATACGGCTGACTTTGAGTGGGTGATGTGGTTCTCTACGTTCCGGGACCACATCCTCTTCGCCCTGTCTGGTCATGTGATCTTCGCTAAGATCTGCTCCATGCTGGCTCCACAGcATAGGAGCCTGATGTACCTGTGTTACGGTACCCTGGCGGTGCTGGTCACTATGGGTTGGACCTACACCACTCTGATCCTGTCCCACTGTGTGCTGCTCTACAGTATTTCTCTGGTTAAACTGCGCTGGCTCTGCTTCCTAGCTGGACTCACCACCCTGTCCACATTCAAGATGGAACCATTCATATCCTGGCAGgCTGGTTTTGTGGCGGGGGATTTTGAGCTCCGTTCCGTCCTGTTCTACGGCGGTTGTGGGTTCACCATCATGCGCTGTATGAGTTTTGCTCTGGAGAACTGTGAGAAGAAAGAAGGAAACTACAGCATCCTGGAACTCCTCAAGTACAACTTCTACCTGCCCTTCTTCTACTTCGGACCAATTATGACCTTCGACAAGTTCTACGCTCAGGCCAACAAGGCTGACCTGACCCGTCAGGAGGGGGCGATATGGAACATATCTCTGCAGGGACTCATTCACCTGGGGGCCATATTAACAGTGGACATCCTCTTCCACTTCCTGTACATCCTGAGCATCCCCACGGACATGAAGCTGCTCAAACACATGTCTGACTGGGctgtagttggtctGGCCTACTGTAACCTGGTGTATGACTGGGTGAAGGCAGCGGTGATGTTTGGGGTGATCAACACTGTGTCTAGACTGGATCATCTGGACCCTCCTCAACCTCCAAAATGTATCACAATGCTCTACGTCTTCTCTGAGACACACTTTGATAGAGGAATAAATGACTGGCTGTGCAAgtatGTGTATAACTACCTGGGAGGGAAGCATGACACTGTGTGGGATGAGACCATTGCTACACTGTGTACTTTTGGCATCACTGTGCTGTGGCTGGGACCCTGTCAGGTGGTGTTCATCTGGGCCTTCTTCAACTGCTTCGGACTCAACTTCGAGCTCTGGACTGCCAAGTTTGTCTGCATGGAACCCTTTGCTTCTCTAGAGATGGCGATGTCTCCTGCCATGTCTCGTAGGATCAGAGCTGTGTTCAACACCTTTAACTTCTGGACCATCGTCCTCTACAACGTCATCGCTCTCAACAGCCTGGAGTTCACTAAGCTGGTCGCCAGGAGACTGCTGCTTAAAGGCTtccccatcaccaccatcactgtGATGATAACTAGTATGTTAATGTATATACAGTTATTAGACTATGTTGACTTGTTCCTCCCCCTCCAGGCTtccccatcaccaccatcactgtGATGATAACTAGTATGTTAATGTATATATAGTTATTAGACTATGTTGACTTGTTCCTCCCCCTCCAGGCTTCCCCATCACCAATCATGTCCT

Function

symbol description
hhatl Predicted to enable acyltransferase activity. Predicted to be involved in negative regulation of N-terminal protein palmitoylation. Located in perinuclear region of cytoplasm.

NR:

description
protein-cysteine N-palmitoyltransferase HHAT-like protein

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K24678 HHAT; protein-cysteine N-palmitoyltransferase HHAT

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945627.1 False 2220 mRNA 0.50 12 1054963 1101022
XM_036945628.1 True 1889 mRNA 0.50 12 1057691 1101022

Neighbor

gene id symbol gene type direction distance location
klhl40b LOC106590700 coding downstream 14096 1024574 ~ 1040867 (-)
sec22c sec22c coding downstream 211360 826598 ~ 843603 (-)
LOC118938951 NA coding downstream 222862 830248 ~ 832327 (-)
vipr1b vipr1 coding downstream 249570 572798 ~ 805393 (-)
smpx smpx coding downstream 807805 211098 ~ 247177 (-)
LOC110489513 NA coding upstream 126818 1227840 ~ 1288739 (-)
LOC110489519 LOC106590690 coding upstream 331339 1432361 ~ 1472553 (-)
LOC110490875 LOC106590692 coding upstream 432068 1533090 ~ 1601607 (-)
LOC118938935 NA coding upstream 513023 1614045 ~ 1693432 (-)
LOC110489515 glyg coding upstream 757508 1858530 ~ 1895147 (-)
G1249044 NA non-coding downstream 988 1053502 ~ 1053975 (-)
G1249043 NA non-coding downstream 1557 1052761 ~ 1053406 (-)
G1249042 NA non-coding downstream 5860 1048533 ~ 1049103 (-)
G1249030 NA non-coding downstream 35036 1013811 ~ 1019927 (-)
G1249013 NA non-coding downstream 128965 925320 ~ 925998 (-)
G1249265 NA non-coding upstream 170012 1271034 ~ 1272116 (-)
G1249277 NA non-coding upstream 195671 1296693 ~ 1296963 (-)
G1249308 NA non-coding upstream 271558 1372580 ~ 1373535 (-)
G1249318 NA non-coding upstream 293558 1394580 ~ 1395187 (-)
G1249326 LOC106581475 non-coding upstream 309097 1409189 ~ 1411097 (-)
G1249325 NA other upstream 302174 1403196 ~ 1405878 (-)
G1249729 NA other upstream 705962 1806984 ~ 1807621 (-)
G1250031 LOC107579696 other upstream 1246569 2347591 ~ 2348068 (-)
G1250592 NA other upstream 1886092 2987114 ~ 2987410 (-)

Expression

hhatlb(hhatl) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 300.
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hhatlb(hhatl) Expression in each Bioproject

Bar chart with 16 bars.
hhatlb(hhatl) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network