vill (vill)


Basic Information

Item Value
gene id vill
gene name vill
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 1130239 ~ 1193766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945629.1
GTGTTCAGAACAGTGGGAGGACAGACATAAACACACCCTACCTTACCGACGccaccacacacactcatactcacacagagggagagagaggagtagttaTAGTTCTCACTTAGAGTTATATCTAGACCAGACCACCGGAGATATCACTGCTTCTCCTATACCTGGCCCATCCTGTATCACTCACCTGCCATAGTTGTGCAGAATGACTGAAGAAAGTCCAGAAGCCTTTCAGCATGTCAGCAGGAAGTCTGGCCTACAGATCTGGACCATCAATAACATGAAGATGGTTCCTGTACCGGACCAAGCTTTTGGGAACTTCTTTGAGGGAGATTGCTACATTGTCCTCTATaggaGTCAGGGCTCCAGTAACTCCATGGACATCCACTACTGGATTGGTAACTCCTCCTCTCAGGATGAGCAGGGAGCGGCGGCCATCTTAGTGACTCAGCTGGATGAGTTCCTGGGGGGCAGTCCTGTCCAGCACAGGGAGGTACAGGCCGCAGAGTCCTCCAAGTTCAGGAGCTACTTCAGGAACGGACTCATCTATAAGAAGGGTGGTGTGGATTCGGGGTTCCGTCATGTCGAGTCCAATGTGTACAAAATCCTGCGGCTTCTGCACATTAAAGGAAGGAAGCATGTCACCGCCACAGAGGTGGAGGTGTCGTGGAGTAGCTTCAACAGTGGAGACGTCTTCCTTCTGGACATGGGGAAGGTCATAGTTCAGTGGAATGGCCCTCAGAGCAACCGGAGTGAGAAACTCAAGGCGATGCTGCTGGCCCAGGATGTCCGTGACAGGGAGCGAGGGGGGCGTGCTCAGATcggggtggtggaggggggagatGAGGAAGACTCCCCTGAGCTGATGAAGATCATGAGGGCTGTGCTGGGTCAGAGGTCAGGCAAGCTGAAGGAGGCGGAGCCTGATGACACACCAGACCGCCATCAGCAGACCGCCAACATCAGGCTCTACAATGTGTCTGATGAGAGTGGCAAACTGGTCGTCCAGGAAGTGGCCATGCAGCCTCTGACTCAAGACCTGCTGCACTCCACGGAATGCTATATTGTGGACCAGGGTGGTTTGAGTGTGCTGGTGTGGAAGGGAAAGGAGGCTTCTATAGAGGAGCGTCGCTCGGCACTGGGCAGGGCAGTGGGCTTCATCAAGGCTAAGAACTACTCCAGCAGCACTAATGTGGAGGTGATGGCTGAGGGAGGAGAGTCAGCCATGTTCAAACATCTCTTCATTTCATGGACAGAGAAGGGACAGACAAAAGGCCTGGGGAATGTGTACACCACTGGGAAGATAGCTAAGGTTGAGCAGGTGAAGTTTGATGTGATGGAGCTTCATGCTCGTCCTGAACTGGCAGCACAGCAACGCATGGTGGACGACGCCTCTGGACAGGTTCAGATCTGGCGTATAGAGGACCTGGAGTTGAGAGAGCTCCACCCCAGCTCGTTCGGTCAGTTCTACGGAGGAGACTGTTACCTGGTGCTCTACACCTACAAGAGAGCTAGCAAGCTGCAGTACATACTCTACATGTGGCAGGGTCGCCATGCTACTCAGGATGAGATCACATCGTGTGCCTATCAGGCCGTTGCCATGGACAACAAGTACAGCGGAGTGCCGGTCCAAGTCAGGGTGGTCATGGGAAAAGAGCCGCGTCACTTCCTGGCCATCTTTAAAGGAAAACTCATCATCTTCGAGgGTGGTACAGGCAGAGCGGGGGTGACTAATCCAGGCCCGGGAGCCAGACTGTTCCAGGTTCGAGGGACTCATGAGATGAACACTAGGGCTACTGAGGTCCCAGCCCGCTCCTCATCACTCAACACCAATGATGTGTTCCTGCTAAAAACTGACCACACGATTTACCTGTGGTATGGCAAGGGTTGTagtggtgatgagagagagatggcaaaGGCAGTGGCAGACGTTCTGTCCAGGCAGGATAAACAGGTTGTTATGGAGGGACAGGAGCCTGCTGAGTTCTGGGTGGCTCTGGGAGGGAAGGCCCCTTACGCCTGCGacaagagACTGCAGAAGGAGGAGACTCCCCACAGCCCTCGGTTGTTTGAATGCTCCAATCAGACTGGTCGGTTCAGGATGACAGAGGTGGAGGACTTGACTCAGGAGGACCTGGACCAGGATGATGTCATGCTGCTAGACAcctgggaggagATCTTCCTGTGGATTGGCAGGTCTGCCAACGAATATGAGACCAAGGAAGCGTGTAACAGTGCTCTAGAGTACCTGAGGACCCACCCAGCGGGGCGGGACCCTGACACACCCATCATCTCTGTCAAACAGGGCTACGAGCCACTGACCTTCACCGGATGGTTCAACGCATGGGACCCTCAGAAGTGGAGCGGAGGCTCCTCCTATGAGGAAATGAAACAAAACCTGGGCGATGTTGCATCTATCTCTCAGATTACTGTAAATCTGAACAACACAGAGCTGAGTAAGGGTTCTGCTGGGGGGAGTAGTGGAGGTGCTGGGTACAGCGCTCCAGGAGGCCCAGCCCAGTTCAGCTCTCCACCATCCTACAAGCTCCACCTTGGGACAGGAGGGGGCTCCTGTGGCCCTTCCAGCTCAGCCACCCCTGGAGGTCAGGACTGCCTGTCCACCACCTTCAGCACTACCCTGTCCCCcaccctgtcctccccctccctGGGCCCCTCCATCACCCTGGTCCCCTCCACCACCCCAGCTCCCAGGACTGGAGAGTACCTGGGCCCTGAGCTGCTGATCAACAAGAGCCCCAATGAGCTGCCCAAGGGAGTGGACCCTAataggagagaggaCTATCTCTCTGATGTGGATCTGGAGAACCTGCTGGGTTGTTCTCGGTCTGGTTTCCAGCGGCTGCCCAGGTGGCGGCAGAACGACCTGAAGAAGAAGGCAGGGCTGTTCTAAGTGGGCCGTCGCGTCAGTTGGGATGACATCGGGACATAGCTTATTAGAGTTGAAAATGTTCCTTGATTGTGTTCAAGTTGTTTTCAAGTCGAGAGAGAgcgggaatgtttttttttaaatcgtttttcaacagaacagtGTAGAAGTGGCAGCGACATGCTGAACTGAAGACCTGGAACAGAGACACTGTGAACTGTGAGAACAACTCAAAACAAAAGGTTCCATACCTTTCACATCCAGGTCAAGGTAGATGCACTGTATAGACGTGTACTTCATACATACTTCAGCTGAATGTGTGCTATGCCTGATTACTAACAGTACAACCCTACAAGCAGTAAAACAGAgagacatttaaaaaatacattatttattgAACAAAACTATGCCCAGTTGATATGTTCTACCAGCTGAACAGAATAAACAGCAGGTATTTTTTAAACATTGATTCGATGAAcatgtctttattttttttatctcatgATCAGTTGCTATATTTGATGTTTTGTTATATTTTCTCTACATTTCAAAGATGAGTTATGAttataaaacagtttttttaatgtattttctaACAATCAAACATAATGAACAAACCCTCTCATAATCACAAATCGAATTATCATGAAGCCTGTCACCAGATCTctaataataaaacaatatacaATCAA
>XM_036945630.1
ACATTGTCCTCTATaggaGTCAGGGCTCCAGTAACTCCATGGACATCCACTACTGGATTGGTAACTCCTCCTCTCAGGATGAGCAGGGAGCGGCGGCCATCTTAGTGACTCAGCTGGATGAGTTCCTGGGGGGCAGTCCTGTCCAGCACAGGGAGGTACAGGCCGCAGAGTCCTCCAAGTTCAGGAGCTACTTCAGGAACGGACTCATCTATAAGAAGGGTGGTGTGGATTCGGGGTTCCGTCATGTCGAGTCCAATGTGTACAAAATCCTGCGGCTTCTGCACATTAAAGGAAGGAAGCATGTCACCGCCACAGAGGTGGAGGTGTCGTGGAGTAGCTTCAACAGTGGAGACGTCTTCCTTCTGGACATGGGGAAGGTCATAGTTCAGTGGAATGGCCCTCAGAGCAACCGGAGTGAGAAACTCAAGGCGATGCTGCTGGCCCAGGATGTCCGTGACAGGGAGCGAGGGGGGCGTGCTCAGATcggggtggtggaggggggagatGAGGAAGACTCCCCTGAGCTGATGAAGATCATGAGGGCTGTGCTGGGTCAGAGGTCAGGCAAGCTGAAGGAGGCGGAGCCTGATGACACACCAGACCGCCATCAGCAGACCGCCAACATCAGGCTCTACAATGTGTCTGATGAGAGTGGCAAACTGGTCGTCCAGGAAGTGGCCATGCAGCCTCTGACTCAAGACCTGCTGCACTCCACGGAATGCTATATTGTGGACCAGGGTGGTTTGAGTGTGCTGGTGTGGAAGGGAAAGGAGGCTTCTATAGAGGAGCGTCGCTCGGCACTGGGCAGGGCAGTGGGCTTCATCAAGGCTAAGAACTACTCCAGCAGCACTAATGTGGAGGTGATGGCTGAGGGAGGAGAGTCAGCCATGTTCAAACATCTCTTCATTTCATGGACAGAGAAGGGACAGACAAAAGGCCTGGGGAATGTGTACACCACTGGGAAGATAGCTAAGGTTGAGCAGGTGAAGTTTGATGTGATGGAGCTTCATGCTCGTCCTGAACTGGCAGCACAGCAACGCATGGTGGACGACGCCTCTGGACAGGTTCAGATCTGGCGTATAGAGGACCTGGAGTTGAGAGAGCTCCACCCCAGCTCGTTCGGTCAGTTCTACGGAGGAGACTGTTACCTGGTGCTCTACACCTACAAGAGAGCTAGCAAGCTGCAGTACATACTCTACATGTGGCAGGGTCGCCATGCTACTCAGGATGAGATCACATCGTGTGCCTATCAGGCCGTTGCCATGGACAACAAGTACAGCGGAGTGCCGGTCCAAGTCAGGGTGGTCATGGGAAAAGAGCCGCGTCACTTCCTGGCCATCTTTAAAGGAAAACTCATCATCTTCGAGgGTGGTACAGGCAGAGCGGGGGTGACTAATCCAGGCCCGGGAGCCAGACTGTTCCAGGTTCGAGGGACTCATGAGATGAACACTAGGGCTACTGAGGTCCCAGCCCGCTCCTCATCACTCAACACCAATGATGTGTTCCTGCTAAAAACTGACCACACGATTTACCTGTGGTATGGCAAGGGTTGTagtggtgatgagagagagatggcaaaGGCAGTGGCAGACGTTCTGTCCAGGCAGGATAAACAGGTTGTTATGGAGGGACAGGAGCCTGCTGAGTTCTGGGTGGCTCTGGGAGGGAAGGCCCCTTACGCCTGCGacaagagACTGCAGAAGGAGGAGACTCCCCACAGCCCTCGGTTGTTTGAATGCTCCAATCAGACTGGTCGGTTCAGGATGACAGAGGTGGAGGACTTGACTCAGGAGGACCTGGACCAGGATGATGTCATGCTGCTAGACAcctgggaggagATCTTCCTGTGGATTGGCAGGTCTGCCAACGAATATGAGACCAAGGAAGCGTGTAACAGTGCTCTAGAGTACCTGAGGACCCACCCAGCGGGGCGGGACCCTGACACACCCATCATCTCTGTCAAACAGGGCTACGAGCCACTGACCTTCACCGGATGGTTCAACGCATGGGACCCTCAGAAGTGGAGCGGAGGCTCCTCCTATGAGGAAATGAAACAAAACCTGGGCGATGTTGCATCTATCTCTCAGATTACTGTAAATCTGAACAACACAGAGCTGAGTAAGGGTTCTGCTGGGGGGAGTAGTGGAGGTGCTGGGTACAGCGCTCCAGGAGGCCCAGCCCAGTTCAGCTCTCCACCATCCTACAAGCTCCACCTTGGGACAGGAGGGGGCTCCTGTGGCCCTTCCAGCTCAGCCACCCCTGGAGGTCAGGACTGCCTGTCCACCACCTTCAGCACTACCCTGTCCCCcaccctgtcctccccctccctGGGCCCCTCCATCACCCTGGTCCCCTCCACCACCCCAGCTCCCAGGACTGGAGAGTACCTGGGCCCTGAGCTGCTGATCAACAAGAGCCCCAATGAGCTGCCCAAGGGAGTGGACCCTAataggagagaggaCTATCTCTCTGATGTGGATCTGGAGAACCTGCTGGGTTGTTCTCGGTCTGGTTTCCAGCGGCTGCCCAGGTGGCGGCAGAACGACCTGAAGAAGAAGGCAGGGCTGTTCTAAGTGGGCCGTCGCGTCAGTTGGGATGACATCGGGACATAGCTTATTAGAGTTGAAAATGTTCCTTGATTGTGTTCAAGTTGTTTTCAAGTCGAGAGAGAgcgggaatgtttttttttaaatcgtttttcaacagaacagtGTAGAAGTGGCAGCGACATGCTGAACTGAAGACCTGGAACAGAGACACTGTGAACTGTGAGAACAACTCAAAACAAAAGGTTCCATACCTTTCACATCCAGGTCAAGGTAGATGCACTGTATAGACGTGTACTTCATACATACTTCAGCTGAATGTGTGCTATGCCTGATTACTAACAGTACAACCCTACAAGCAGTAAAACAGAgagacatttaaaaaatacattatttattgAACAAAACTATGCCCAGTTGATATGTTCTACCAGCTGAACAGAATAAACAGCAGGTATTTTTTAAACATTGATTCGATGAAcatgtctttattttttttatctcatgATCAGTTGCTATATTTGATGTTTTGTTATATTTTCTCTACATTTCAAAGATGAGTTATGAttataaaacagtttttttaatgtattttctaACAATCAAACATAATGAACAAACCCTCTCATAATCACAAATCGAATTATCATGAAGCCTGTCACCAGATCTctaataataaaacaatatacaATCAA

Function

symbol description
vill Predicted to enable actin filament binding activity. Predicted to act upstream of or within actin filament capping and cytoskeleton organization. Orthologous to human VILL (villin like).

NR:

description
villin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945629.1 False 3576 mRNA 0.51 20 1130239 1193766
XM_036945630.1 True 3241 mRNA 0.52 18 1144098 1193766

Neighbor

gene id symbol gene type direction distance location
LOC110490871 LOC106584129 coding upstream 72496 1056548 ~ 1057743 (+)
zbtb47b zbtb47 coding upstream 115506 871208 ~ 1014733 (+)
si:ch211-161h7.4 LOC106590704 coding upstream 575221 507000 ~ 555018 (+)
LOC118938950 NA coding upstream 655668 470671 ~ 474571 (+)
ptchd1 ptchd1 coding upstream 659598 389255 ~ 470641 (+)
map3k22 LOC106590696 coding downstream 106874 1300640 ~ 1404290 (+)
myd88 myd88 coding downstream 223089 1416855 ~ 1427915 (+)
csrnp1b LOC106594516 coding downstream 317080 1510846 ~ 1523800 (+)
LOC110514451 LOC106594280 coding downstream 543396 1737162 ~ 1757942 (+)
LOC118938908 NA coding downstream 571445 1765211 ~ 1766262 (+)
G1248641 NA non-coding upstream 9063 1120498 ~ 1121176 (+)
G1248614 NA non-coding upstream 83644 1045849 ~ 1046595 (+)
G1248605 NA non-coding upstream 96558 1032311 ~ 1033681 (+)
G1248558 NA non-coding upstream 110299 1018363 ~ 1019940 (+)
G1248594 NA non-coding upstream 124910 1004935 ~ 1005329 (+)
G1249108 NA non-coding downstream 10047 1203813 ~ 1209360 (+)
G1249158 NA non-coding downstream 102766 1296532 ~ 1296892 (+)
G1249164 NA non-coding downstream 111472 1305238 ~ 1306048 (+)
G1249169 NA non-coding downstream 121323 1315089 ~ 1315593 (+)
G1249170 NA non-coding downstream 123355 1317121 ~ 1317852 (+)
G1248124 NA other upstream 1023768 79681 ~ 140421 (+)
G1249139 NA other downstream 215739 1409505 ~ 1410999 (+)
G1250120 NA other downstream 1279129 2472895 ~ 2473370 (+)
G1250863 NA other downstream 2160040 3353806 ~ 3354295 (+)
G1250885 NA other downstream 2177430 3371196 ~ 3372193 (+)
LOC110489525 LOC106590672 other downstream 3272010 4465748 ~ 4468522 (+)

Expression


Co-expression Network