Gene
RNA
| Item | Value |
|---|---|
| gene id | map3k22 |
| gene name | LOC106590696 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 1300640 ~ 1404290 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mitogen-activated protein kinase kinase kinase 3-like |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| id | description |
|---|---|
| K20606 | ANP1; mitogen-activated protein kinase kinase kinase ANP1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036945633.1 | False | 3089 | mRNA | 0.52 | 18 | 1300640 | 1404290 |
| XM_036945634.1 | True | 3071 | mRNA | 0.52 | 18 | 1300640 | 1404290 |
1,200,000
1,220,000
1,240,000
1,260,000
1,280,000
1,300,000
1,300,000
1,320,000
1,340,000
1,360,000
1,380,000
1,400,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vill | vill | coding | upstream | 106874 | 1130239 ~ 1193766 (+) |
| LOC110490871 | LOC106584129 | coding | upstream | 242897 | 1056548 ~ 1057743 (+) |
| zbtb47b | zbtb47 | coding | upstream | 285907 | 871208 ~ 1014733 (+) |
| si:ch211-161h7.4 | LOC106590704 | coding | upstream | 745622 | 507000 ~ 555018 (+) |
| LOC118938950 | NA | coding | upstream | 826069 | 470671 ~ 474571 (+) |
| myd88 | myd88 | coding | downstream | 12565 | 1416855 ~ 1427915 (+) |
| csrnp1b | LOC106594516 | coding | downstream | 106556 | 1510846 ~ 1523800 (+) |
| LOC110514451 | LOC106594280 | coding | downstream | 332872 | 1737162 ~ 1757942 (+) |
| LOC118938908 | NA | coding | downstream | 360921 | 1765211 ~ 1766262 (+) |
| LOC110490874 | LOC106590688 | coding | downstream | 386723 | 1791013 ~ 1842491 (+) |
| G1249158 | NA | non-coding | upstream | 3748 | 1296532 ~ 1296892 (+) |
| G1249108 | NA | non-coding | upstream | 91280 | 1203813 ~ 1209360 (+) |
| G1248641 | NA | non-coding | upstream | 179464 | 1120498 ~ 1121176 (+) |
| G1248614 | NA | non-coding | upstream | 254045 | 1045849 ~ 1046595 (+) |
| G1248605 | NA | non-coding | upstream | 266959 | 1032311 ~ 1033681 (+) |
| G1249137 | NA | non-coding | downstream | 2968 | 1407258 ~ 1408950 (+) |
| G1249139 | NA | non-coding | downstream | 6377 | 1409505 ~ 1410999 (+) |
| G1249204 | NA | non-coding | downstream | 32801 | 1437091 ~ 1439565 (+) |
| G1249196 | NA | non-coding | downstream | 43089 | 1447379 ~ 1447625 (+) |
| G1249225 | NA | non-coding | downstream | 79957 | 1484247 ~ 1484657 (+) |
| ptchd1 | ptchd1 | other | upstream | 833815 | 389255 ~ 470641 (+) |
| G1248124 | NA | other | upstream | 1194169 | 79681 ~ 140421 (+) |
| G1250120 | NA | other | downstream | 1068605 | 2472895 ~ 2473370 (+) |
| G1250863 | NA | other | downstream | 1949516 | 3353806 ~ 3354295 (+) |
| G1250885 | NA | other | downstream | 1966906 | 3371196 ~ 3372193 (+) |
| LOC110489525 | LOC106590672 | other | downstream | 3061486 | 4465748 ~ 4468522 (+) |
