Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938936 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 4568529 ~ 4570176 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: procyclic form-specific polypeptide B-alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036945596.1 | True | 1311 | mRNA | 0.51 | 6 | 4568529 | 4570176 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490880 | LOC106590674 | coding | downstream | 400838 | 4154252 ~ 4167691 (-) |
| LOC110512106 | LOC106590676 | coding | downstream | 467348 | 4032228 ~ 4101181 (-) |
| dipk2ab | LOC106590677 | coding | downstream | 592017 | 3870649 ~ 3976512 (-) |
| zic1 | LOC100136467 | coding | downstream | 2107548 | 2455923 ~ 2460981 (-) |
| LOC110490877 | LOC106579762 | coding | downstream | 2500305 | 2063991 ~ 2068224 (-) |
| LOC110490881 | LOC106590669 | coding | upstream | 171504 | 4741680 ~ 4769343 (-) |
| LOC110490882 | LOC107696012 | coding | upstream | 323907 | 4894083 ~ 5003661 (-) |
| LOC110490885 | LOC106590660 | coding | upstream | 1290529 | 5860705 ~ 5867522 (-) |
| LOC110489534 | NA | coding | upstream | 1623381 | 6193557 ~ 6194985 (-) |
| LOC110490887 | LOC106590652 | coding | upstream | 2217548 | 6787724 ~ 6813310 (-) |
| G1251899 | NA | non-coding | downstream | 48368 | 4515613 ~ 4520161 (-) |
| G1251888 | NA | non-coding | downstream | 63083 | 4484126 ~ 4505446 (-) |
| G1251896 | NA | non-coding | downstream | 63196 | 4504892 ~ 4505333 (-) |
| G1251881 | tceb1 | non-coding | downstream | 100314 | 4465454 ~ 4468215 (-) |
| G1251812 | NA | non-coding | downstream | 290683 | 4277547 ~ 4277846 (-) |
| G1251938 | NA | non-coding | upstream | 46690 | 4616866 ~ 4617631 (-) |
| G1251944 | NA | non-coding | upstream | 55128 | 4625304 ~ 4625633 (-) |
| G1251970 | NA | non-coding | upstream | 129017 | 4699193 ~ 4726989 (-) |
| G1251973 | NA | non-coding | upstream | 140454 | 4710630 ~ 4712465 (-) |
| G1251965 | rpl7 | non-coding | upstream | 212958 | 4782640 ~ 4788427 (-) |
| G1250592 | NA | other | downstream | 1581119 | 2987114 ~ 2987410 (-) |
| G1250031 | LOC107579696 | other | downstream | 2220461 | 2347591 ~ 2348068 (-) |
| G1249729 | NA | other | downstream | 2760908 | 1806984 ~ 1807621 (-) |
| G1249326 | LOC106581475 | other | downstream | 3157586 | 1409189 ~ 1411097 (-) |
| G1252027 | NA | other | upstream | 269208 | 4839384 ~ 4839879 (-) |
| G1253229 | NA | other | upstream | 1836895 | 6407071 ~ 6407289 (-) |
| G1253278 | NA | other | upstream | 1892026 | 6462202 ~ 6462560 (-) |
