Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938784 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 10436449 ~ 10437044 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036039.1 | False | 429 | mRNA | 0.44 | 3 | 10436493 | 10437015 |
| TU1436009 | True | 223 | lncRNA | 0.43 | 4 | 10436449 | 10437044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490904 | LOC106590606 | coding | downstream | 67760 | 10337017 ~ 10368733 (-) |
| LOC110489570 | LOC106590600 | coding | downstream | 140451 | 10256343 ~ 10296042 (-) |
| LOC110489568 | LOC106590608 | coding | downstream | 189933 | 10220497 ~ 10246560 (-) |
| LOC110489563 | cbln2b | coding | downstream | 1014470 | 9418351 ~ 9422023 (-) |
| LOC110514162 | LOC106590620 | coding | downstream | 1472280 | 8963472 ~ 8964213 (-) |
| trnac-gca-10 | NA | coding | upstream | 1380 | 10438395 ~ 10438466 (-) |
| LOC110489574 | hgd | coding | upstream | 8551 | 10445566 ~ 10459083 (-) |
| LOC110490822 | NA | coding | upstream | 157534 | 10594549 ~ 10600184 (-) |
| LOC110489577 | LOC106590594 | coding | upstream | 197045 | 10634060 ~ 10648867 (-) |
| LOC118938785 | NA | coding | upstream | 210858 | 10647873 ~ 10648163 (-) |
| G1257042 | NA | non-coding | downstream | 48359 | 10387784 ~ 10388134 (-) |
| G1257041 | NA | non-coding | downstream | 49518 | 10386655 ~ 10386975 (-) |
| G1256969 | NA | non-coding | downstream | 59284 | 10376931 ~ 10377209 (-) |
| G1256952 | NA | non-coding | downstream | 102407 | 10333715 ~ 10334086 (-) |
| G1256951 | NA | non-coding | downstream | 102889 | 10333321 ~ 10333604 (-) |
| G1257090 | NA | non-coding | upstream | 51846 | 10488861 ~ 10521170 (-) |
| G1257073 | NA | non-coding | upstream | 55921 | 10492936 ~ 10503880 (-) |
| G1257256 | NA | non-coding | upstream | 169998 | 10607013 ~ 10607770 (-) |
| G1257263 | LOC106590595 | non-coding | upstream | 181679 | 10618694 ~ 10622859 (-) |
| G1257267 | NA | non-coding | upstream | 203087 | 10640102 ~ 10695847 (-) |
| G1256654 | NA | other | downstream | 561751 | 9873519 ~ 9874742 (-) |
| G1256146 | NA | other | downstream | 957675 | 9477813 ~ 9478818 (-) |
| G1255735 | NA | other | downstream | 1412490 | 9023584 ~ 9024003 (-) |
| G1254214 | NA | other | downstream | 3110037 | 7325712 ~ 7326456 (-) |
| G1257642 | NA | other | upstream | 381428 | 10818443 ~ 10818911 (-) |
| LOC110489593 | LOC106590549 | other | upstream | 2073857 | 12507315 ~ 12533443 (-) |
| LOC110489604 | mllt10 | other | upstream | 2905038 | 13288725 ~ 13369504 (-) |
| G1260199 | NA | other | upstream | 2949374 | 13386389 ~ 13387587 (-) |
| G1260226 | LOC106590529 | other | upstream | 3025850 | 13462865 ~ 13505161 (-) |
