Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938942 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 10673749 ~ 10674545 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sperm acrosomal protein FSA-ACR.1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118938942 | True | 797 | mRNA | 0.54 | 1 | 10673749 | 10674545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938941 | NA | coding | downstream | 4 | 10672950 ~ 10673745 (-) |
| LOC110489577 | LOC106590594 | coding | downstream | 24882 | 10634060 ~ 10648867 (-) |
| LOC118938785 | NA | coding | downstream | 25586 | 10647873 ~ 10648163 (-) |
| LOC110490822 | NA | coding | downstream | 73565 | 10594549 ~ 10600184 (-) |
| LOC110489574 | hgd | coding | downstream | 214666 | 10445566 ~ 10459083 (-) |
| LOC110490906 | LOC106578456 | coding | upstream | 11376 | 10685921 ~ 10711135 (-) |
| LOC110489580 | LOC106590592 | coding | upstream | 101151 | 10775696 ~ 10796596 (-) |
| LOC110490908 | LOC106590575 | coding | upstream | 795229 | 11469774 ~ 11498449 (-) |
| ropn1l | ropn1l | coding | upstream | 835081 | 11509626 ~ 11525612 (-) |
| LOC110489583 | LOC106590573 | coding | upstream | 865084 | 11539629 ~ 11557471 (-) |
| G1257270 | NA | non-coding | downstream | 20325 | 10652957 ~ 10653424 (-) |
| G1257263 | LOC106590595 | non-coding | downstream | 50890 | 10618694 ~ 10622859 (-) |
| G1257256 | NA | non-coding | downstream | 65979 | 10607013 ~ 10607770 (-) |
| G1257090 | NA | non-coding | downstream | 152579 | 10488861 ~ 10521170 (-) |
| G1257286 | NA | non-coding | upstream | 3646 | 10678191 ~ 10678610 (-) |
| G1257303 | NA | non-coding | upstream | 49763 | 10724308 ~ 10735626 (-) |
| G1257316 | NA | non-coding | upstream | 86954 | 10761499 ~ 10761719 (-) |
| G1257318 | NA | non-coding | upstream | 88817 | 10763362 ~ 10763636 (-) |
| G1257347 | NA | non-coding | upstream | 129388 | 10803933 ~ 10804200 (-) |
| LOC110489570 | LOC106590600 | other | downstream | 377759 | 10256343 ~ 10296042 (-) |
| G1256654 | NA | other | downstream | 799007 | 9873519 ~ 9874742 (-) |
| G1256146 | NA | other | downstream | 1194931 | 9477813 ~ 9478818 (-) |
| G1255735 | NA | other | downstream | 1649746 | 9023584 ~ 9024003 (-) |
| G1254214 | NA | other | downstream | 3347293 | 7325712 ~ 7326456 (-) |
| G1257642 | NA | other | upstream | 143898 | 10818443 ~ 10818911 (-) |
| LOC110489593 | LOC106590549 | other | upstream | 1836327 | 12507315 ~ 12533443 (-) |
| LOC110489604 | mllt10 | other | upstream | 2667508 | 13288725 ~ 13369504 (-) |
| G1260199 | NA | other | upstream | 2711844 | 13386389 ~ 13387587 (-) |
| G1260226 | LOC106590529 | other | upstream | 2788320 | 13462865 ~ 13505161 (-) |
