LOC110490908 (LOC106590575)


Basic Information

Item Value
gene id LOC110490908
gene name LOC106590575
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 11469774 ~ 11498449 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036943699.1
gaggagggggggacggGTAGTACACTACGAAACTAATCGGATTATGGGAAAGTTTAGCGTGTGCCTGTTTCTCTATTCTACATTggtttctattctattctacactggTTTGGTGTGTGTGGTACTTTTAATTTCTGTACTGTCCGTTTTCTCCCCGAAATGAGGACCGGAATTTTGTCTCATCTCGATGATGAAATTACAAATCGGTGGAACTCTCTCGGTTTGATTTGCAGAGGAGGACCTTTGACTGGTGAATTAAAATGAAGACAAAAAACACCAATAATCTTATAATTTCGAATGCGGACTACAAACCCGTGTTGCCTAGGTTGGTACTCCAGAGCGAGAGCAGAAATATGGTTTGATGTTTATTTCTCACGGAATGATGGAGTTGAAATATTAACCGGGAAATATTCCCCAAAGGAGTCGGAGCGGCAGTTGGCCTCTTGGATTACGTCAAAACTATTTGCCAAACCTTCACTTTCATTTCATTTCCAGGCTCTTTACAAAGTTAAACTCATAATCCGCGTTGATGTTGGCAAAAACATCCAAGTGCGCCAGCCCACATCCACCATTCTTTCCCCCAAGGAGGACAGCCACCTAGGGGGTTAGATGGTTCTGATCACGGACGAGAGAGACGGAGGTGGCTCCTCTACTACGACCCGTGTCAACCAGCTGCAGCAGAGCACCAAAGGCGCCAGCGTTTTCGTCCAGGTCCACCCGACCATAACCGCCGAACCCCCGCCCTTATCAAACGACGACTCATACCTCGGGTCCTGTGAGTCTGAAGGAGACGAGGACGATGACTACGAGGAATACGACGATTCATCGTTATTACCGGACACCAAGAGTATCGCCTCGGACGACTCATTCTACCCACCGGACGATGCGTTCGCGGACAACGAGCGGACCCCCTCCCCGCAGAGTCCCGAGCCGTTGTCCTTCTTCCAGGCGTGCTGCACCAACAATGCCACGATAGTCCGGATCATGATCCGACAAGGTGTGAAGGAGGCGGAGGTGAGGGAGACGGATAAAAACAACAGGacggGGTTGATGGTGGCATGCTACCAGGGTTATGTTGACGTTGTCATAGCGTTGGCTCAGTGTTGTCACCTGGATGTCAACTGGCAGGACACTGAGGGGAATACCGCCCTCATCACAGCTGCACAGGCAGGTCACATAATGATCAGTAACTACCTGTTGAACTACTCCCCTGGTCTGGACATAGAGAGGAGGAACTGTCATGGCTTCACCGCTCTGATGAAAGCTGCTATGCAGGGCAGGGTGGAGTGTGTACGAGCCCTGATGCTAGCAGGAGCTGACACGGAGGCGAGGGACTTTGGTCGTCAGCTGACCTCCAGAGAGTGGGCGTTTTTCACAGGACGCTACGACACCGCCTGGGCCATGACACGTCTCCACTCCAGACCCTGTCCTTATCAACTATGTGACGCATACAGTCCAGAGTGGCCCCAGCTGGCGTCTCTAGTATCTAAGGCCCGGGAGCCTCGAGGCTGTATGCAGCGTATATCAGACACCATACGAAACGCTCTGACGTTTGCCAACATCACAGAGCCTGACGACGAAGGAGTCTTAGATCACCTAGTCACCGTGACAACAGCACTGGGGAGCCCCTTCGTGGCGATGGCTTGTTCCACAGTGTGTCCGACAAGCCCACCTTGCGTGGGTAAACGTCGTTACTCCGTCCCAGAGATCCTCCGACGCCAACGGGCCAAAGAACTGAAAACGCAGAACCCTGAGAGGATCGACAACCACGGCAAACTCTTCCAGAACTCACGGGTCACTCTGGTGTCCAAACCTCCAAAGGACCGGCGGACCATCCTGCTACCGCCGAACAAAAACCCCACCACGACTAACCCTACCCTCGGTAAGGTGTCTGCGGCTGGGGCCTCTTCCTCCATGGCCCTGAGAAAGACTAGCCTGCTGCCTCTGGGTATGGTGAAGTGTAGCAGTGTGCGGCCGGGGATGTCCATTCCCAAGGTGAGAATCTCTAAGGCCCCAACGCCGACCTTTGAACCTGAAAGAGTCCACAGGAAGAGCAGCTTTAAAGACGGAGGGGGTGACTTCCTGCAGCTTCCCAAGTGGAGGTATAAAgaactgaaggaggagaggaagagagcagaggaggcggagaggaggagggtggaggcgGCCACGAGGCGGCACCTGGGTTCCAGGAAGAAGAAATGACATCGTAGGAGGAAGTGATGTCACTCCACCCTGTCCTCCACTGTTGCCTAGGTAGCAGTTCAGaggttttttttttgctttttgaGGGAGTAAAAGTGACAGTGCTTTATTTTCTAATGCATTTGATCCACAAAATCAGCAGTATTTTTATAGTGTGATTTCTGTATTACCTGACACTTACCCAGGCTACAAACCCATATGATCTGACTGTGTACAGATCATGTTTCACTAATATATCTGACACATCACACGTTGAAACTTTATTGCCTAAAATGATGATACTATACGCTTCGGGAAGGGTTAGAATGGGACAAATATAAAGGGTTAAAATATGGCGTAGCCTATACAACCGTTGAGTAAGCCTCCCAGCATGTCAAACTGACTTATCGTCAAAGATAAACATAAGATAAGCATTATTTTGTTACCAGTGGCATTTGACTGACTTTTTTAGATAGGCACTGTGCTTTGATATGTTGAAATGGCATCTACTTTATATTGGCTTTTTGAAAGCTTTTCTAATTCTGTGAATGTATTTTGCATATAGATTGTACCTCATCAGGTATTTTTTTATTATGAGTATACTATATATAAACTGTTTTTATTTTCTACTAAAGTTAAAAGCATATTTTGAGaatgtgaatgaaaaaaaaagAACTGTCTTAGAGCAATATTATCTATCAAATGAGGAAAAACAAACTATATCCTGAAATGTTTACATGTTATGAATGAGATCAAAGTACTGCTACACTGACCTCAGATCAGCATCTAGGAGCACCTTCATCATGTACTTTTTACAAACACACGTGTGTATTCCGATCAGACAGACGCCATACTATTGGTTGAGAAGTTCAACAGAAAATAATGGATGAAAATAATGGGAGGTAGGATCACAAATGGCAACTGGAAAGTCTTGATATAATATAGTATTATTATGGTAGGGATTGATATAATGTAGTATTATTATGGTAGGGATTGATATAATGTAGTATTATTATGGTAGGGATTGATATAATGTAGTATTATTATGGTAGGGATTGATATAATATAGTATTATTATGGTAGGGATTGATATAATATAGTATTATTATGGTAGGGATTGATATAATGTAGTATTATTATGGTAGGGATTGATATAATGTAGTATTATTATGGTAGGGATTGAAGAGAAGACAATTTCACAGTGATAACCCCAAAGACAGGACTGGCTTTAAGTGGCATATTTTAGGTGTGTCTAACAGCCAATGTGATAAGTTGCTATGGAGTTAGTAGGGGGCAGTGGTTGGCACAAAAAATAATTTCTGAAAACAAATGAAGCAGGCTAGGCAGCAGGAGTGTAACCCTAAAATGCTTTCCCAGACATATCACAAAGACTCCAGGTGAATTCTGTGTCTGCCCAAGTGTGCCCTGGTTCCCCTCATTGATTTAAAAGGAATGGACGAAAACTCTCTAAACTCTCTGCTTATACAAGTCCAGTtttaaagaatatatatatatatttagtgaACAAGTGTACACTTCTCTCAGGAAGCCACGCTATGGATTTACGAAACAGATTTCCAAGGTTTTGTTTGTTTGAGTGGTAATGGAACCACAATGGGACCAGCAATATCTAGTCCGTGTACTCTACAATGTTCTTGTTTATGGTGAATAAAAACACAAC

Function

NR:

description
ankyrin repeat domain-containing protein 33B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036943699.1 True 3865 mRNA 0.45 6 11469774 11498449

Neighbor

gene id symbol gene type direction distance location
LOC110489580 LOC106590592 coding downstream 673178 10775696 ~ 10796596 (-)
LOC110490906 LOC106578456 coding downstream 758639 10685921 ~ 10711135 (-)
LOC118938942 NA coding downstream 795229 10673749 ~ 10674545 (-)
LOC118938941 NA coding downstream 796029 10672950 ~ 10673745 (-)
LOC110489577 LOC106590594 coding downstream 820907 10634060 ~ 10648867 (-)
ropn1l ropn1l coding upstream 11177 11509626 ~ 11525612 (-)
LOC110489583 LOC106590573 coding upstream 41180 11539629 ~ 11557471 (-)
LOC118938787 NA coding upstream 527106 12025555 ~ 12029416 (-)
LOC110489593 LOC106590549 coding upstream 1008866 12507315 ~ 12533443 (-)
LOC118938943 NA coding upstream 1222352 12720801 ~ 12784079 (-)
G1258055 NA non-coding downstream 1273 11468175 ~ 11468501 (-)
G1258053 NA non-coding downstream 4227 11465292 ~ 11465547 (-)
G1257930 NA non-coding downstream 39505 11426250 ~ 11430269 (-)
G1257929 NA non-coding downstream 43748 11424961 ~ 11426026 (-)
G1257931 NA non-coding downstream 45670 11423736 ~ 11424104 (-)
G1258101 NA non-coding upstream 39613 11538062 ~ 11574096 (-)
G1258113 NA non-coding upstream 65381 11563830 ~ 11564522 (-)
G1258148 NA non-coding upstream 150219 11648668 ~ 11652331 (-)
G1258169 NA non-coding upstream 172578 11671027 ~ 11671618 (-)
G1257642 NA other downstream 650863 10818443 ~ 10818911 (-)
LOC110489570 LOC106590600 other downstream 1173784 10256343 ~ 10296042 (-)
G1256654 NA other downstream 1595032 9873519 ~ 9874742 (-)
G1256146 NA other downstream 1990956 9477813 ~ 9478818 (-)
G1255735 NA other downstream 2445771 9023584 ~ 9024003 (-)
LOC110489604 mllt10 other upstream 1843604 13288725 ~ 13369504 (-)
G1260199 NA other upstream 1887940 13386389 ~ 13387587 (-)
G1260226 LOC106590529 other upstream 1964416 13462865 ~ 13505161 (-)
G1260265 NA other upstream 2038621 13537070 ~ 13538208 (-)

Expression


Co-expression Network