Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489604 |
| gene name | mllt10 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 13288725 ~ 13369504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mllt10 | Predicted to enable histone binding activity and nucleosome binding activity. Acts upstream of or within canonical Wnt signaling pathway and intestinal epithelial structure maintenance. Predicted to be active in nucleus. Is expressed in brain; hindbrain; intestine; and midbrain. Human ortholog(s) of this gene implicated in acute monocytic leukemia and acute myeloid leukemia. Orthologous to human MLLT10 (MLLT10 histone lysine methyltransferase DOT1L cofactor). |
| description |
|---|
| protein AF-10-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036943728.1 | False | 4540 | mRNA | 0.52 | 19 | 13288725 | 13360561 |
| XM_036943730.1 | False | 4510 | mRNA | 0.52 | 18 | 13288725 | 13360592 |
| XM_036943726.1 | False | 4771 | mRNA | 0.52 | 20 | 13288725 | 13360712 |
| XM_036943723.1 | False | 4859 | mRNA | 0.52 | 19 | 13288725 | 13360861 |
| XM_036943724.1 | False | 4838 | mRNA | 0.52 | 18 | 13288725 | 13360861 |
| XM_036943731.1 | False | 4592 | mRNA | 0.51 | 17 | 13288725 | 13360861 |
| XM_036943725.1 | False | 4710 | mRNA | 0.52 | 19 | 13288725 | 13369494 |
| XM_036943727.1 | False | 4771 | mRNA | 0.52 | 20 | 13288725 | 13369494 |
| XM_036943729.1 | False | 4701 | mRNA | 0.52 | 19 | 13288725 | 13369504 |
| XR_005036044.1 | False | 3277 | mRNA | 0.55 | 18 | 13290442 | 13360861 |
| XR_005036045.1 | False | 3192 | mRNA | 0.56 | 19 | 13290450 | 13360861 |
| TU1439728 | False | 2448 | lncRNA | 0.46 | 5 | 13288728 | 13295385 |
| TU1439729 | False | 1831 | TUCP | 0.46 | 5 | 13342053 | 13360778 |
| TU1439722 | False | 1658 | TUCP | 0.47 | 5 | 13342226 | 13360778 |
| TU1439725 | False | 1468 | TUCP | 0.49 | 5 | 13342416 | 13360778 |
| TU1439734 | True | 1388 | lncRNA | 0.48 | 4 | 13342416 | 13360778 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| commd3 | comd3 | coding | downstream | 55804 | 13228122 ~ 13232921 (-) |
| LOC110489603 | bmi1a | coding | downstream | 61312 | 13219351 ~ 13227413 (-) |
| LOC110490912 | spag6 | coding | downstream | 75074 | 13203205 ~ 13213651 (-) |
| LOC110490823 | NA | coding | downstream | 87637 | 13195725 ~ 13201088 (-) |
| LOC110489602 | LOC106590560 | coding | downstream | 112195 | 13170348 ~ 13176530 (-) |
| LOC118938788 | NA | coding | upstream | 29949 | 13399453 ~ 13400920 (-) |
| LOC110515851 | LOC106578380 | coding | upstream | 32589 | 13402093 ~ 13452046 (-) |
| zgc:194621 | LOC106590539 | coding | upstream | 148991 | 13518495 ~ 13528448 (-) |
| LOC110490917 | LOC106590522 | coding | upstream | 187639 | 13557143 ~ 13566414 (-) |
| rpl22l1 | LOC105022019 | coding | upstream | 203645 | 13573149 ~ 13576243 (-) |
| G1259721 | NA | non-coding | downstream | 54522 | 13233693 ~ 13234203 (-) |
| G1259709 | NA | non-coding | downstream | 95943 | 13192561 ~ 13192782 (-) |
| LOC110489601 | LOC106590561 | non-coding | downstream | 131617 | 13152176 ~ 13163864 (-) |
| G1259687 | NA | non-coding | downstream | 150451 | 13138038 ~ 13138274 (-) |
| G1259680 | NA | non-coding | downstream | 166176 | 13117652 ~ 13122549 (-) |
| G1260192 | NA | non-coding | upstream | 1691 | 13371195 ~ 13414889 (-) |
| G1260142 | NA | non-coding | upstream | 29953 | 13399457 ~ 13405025 (-) |
| G1260207 | NA | non-coding | upstream | 36106 | 13405610 ~ 13406205 (-) |
| G1260209 | NA | non-coding | upstream | 53560 | 13423064 ~ 13423444 (-) |
| G1260211 | NA | non-coding | upstream | 63956 | 13433460 ~ 13434219 (-) |
| LOC110489593 | LOC106590549 | other | downstream | 755337 | 12507315 ~ 12533443 (-) |
| G1257642 | NA | other | downstream | 2469814 | 10818443 ~ 10818911 (-) |
| LOC110489570 | LOC106590600 | other | downstream | 2992735 | 10256343 ~ 10296042 (-) |
| G1256654 | NA | other | downstream | 3413983 | 9873519 ~ 9874742 (-) |
| G1256146 | NA | other | downstream | 3809907 | 9477813 ~ 9478818 (-) |
| G1260199 | NA | other | upstream | 16885 | 13386389 ~ 13387587 (-) |
| G1260226 | LOC106590529 | other | upstream | 93361 | 13462865 ~ 13505161 (-) |
| G1260265 | NA | other | upstream | 167566 | 13537070 ~ 13538208 (-) |
| msl2b | LOC106590518 | other | upstream | 338509 | 13708013 ~ 13716136 (-) |
| LOC110489642 | LOC106590491 | other | upstream | 963652 | 14324774 ~ 14335805 (-) |
| G1260154 | NA | non-coding | downstream | 44863 | 13296505 ~ 13297190 (-) |
| G1260164 | NA | non-coding | downstream | 49904 | 13291411 ~ 13292149 (-) |
