sat1 (LOC106590486)


Basic Information

Item Value
gene id sat1
gene name LOC106590486
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 14251426 ~ 14254054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160572.1
AGGTCCCTGCTGCATGAAAACTCTCCCGACATAGGCGTCAGGATCCCAGACTGACTGCGGAGGTTTAAACTCCTGGGACGCGAATGAAGAAACTTCTCCTGCTTCACTTCACATACAGAGGTTTAGTGAGAAAAGGGAAAAAGAGTAAAAGAAGAAAATGGATCGTTTTAAATTGCGAAAAGCTGAACCCAAAGATGTGCCTGACATACTGCGACTCATAAAGGAACTGGCTAAATATGAAGACATGGAAGATCAAGTGATACTGACTGAGAAAGATCTGCTCGAGGACGGATTCGGTGACCATCCATTTTACCACTGCATCGTGGCGGAAGTACCCAGTGAGAAGCAGAGCAACAACGGTCCTGTGGTGATTGGGTTTGCTATGTACTACTTCACCTATGACCCCTGGATTGGCAAGCTGCTCTACCTGGAAGACTTCTTTGTCATGGAAGAGTACAGGGGGTTTGGCATCGGCTCAGAGATCCTCAAGCTCCTCAGTCATaCAGCAGTCAAGACTCGCTGCAGCAGCATGCACTTCATCGTCGCCGAGGGCAACCAGGCGTCGATAGAATTCTACAAGCGTCGTGGCGCAGCTGACCTCTCtctggaggagggatggaggctCTTCAAGATCGACAAGAGCTCCCTCCTCAAGATGTCCTCCGGCCCCGAAGAGTGAGCTGGCCCCGAGACACATAGAAAGATGGGAGTGAGAGACTAAGGCTAATTAAATTGACCCGTCTCTCACTTTAGCAGTTGGGTGGGGGGGGTGTGACTACTGACATATTACCATTAAAAGGGGCATTAAACATTACTAATCATATGTGTACTAACTTAATTTAGGGTTCTGTTTAGATTTTATCTGAAGCCATccttttagtagtgtttttttctgCTAATCAACAACTTCTCTATCTCTATTTTGAATGTTTGTTGGTGTAATTAAAAGTTTCAGAGCAC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008080 N-acetyltransferase activity molecular_function

KEGG:

id description
K00657 speG, SAT; diamine N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160572.1 True 960 mRNA 0.46 6 14251426 14254054

Neighbor

gene id symbol gene type direction distance location
LOC110489635 LOC106590481 coding upstream 33989 14186442 ~ 14217437 (+)
LOC110489629 LOC106590463 coding upstream 193995 14053026 ~ 14057431 (+)
LOC110490921 LOC106590500 coding upstream 251662 13988356 ~ 13999764 (+)
LOC118938945 NA coding upstream 290875 13959042 ~ 13960551 (+)
LOC110489622 LOC106596459 coding upstream 303097 13931664 ~ 13948329 (+)
LOC110489641 LOC106590489 coding downstream 45373 14299427 ~ 14311302 (+)
apodb apod coding downstream 97764 14351818 ~ 14356250 (+)
LOC110489644 NA coding downstream 105994 14360048 ~ 14362944 (+)
LOC110489645 LOC106590496 coding downstream 114108 14368162 ~ 14374980 (+)
si:ch211-161h7.8 kat coding downstream 299781 14553835 ~ 14563740 (+)
G1260497 LOC106579465 non-coding upstream 142980 14107581 ~ 14108446 (+)
G1260117 LOC106590479 non-coding upstream 185691 14065022 ~ 14065735 (+)
G1259884 NA non-coding upstream 235005 14014054 ~ 14016421 (+)
G1259894 LOC106590504 non-coding upstream 246827 14004001 ~ 14004599 (+)
G1260021 NA non-coding upstream 334714 13915674 ~ 13916712 (+)
G1260590 klhl15 non-coding downstream 20322 14274376 ~ 14277808 (+)
G1260629 NA non-coding downstream 109218 14363272 ~ 14364161 (+)
G1260649 NA non-coding downstream 124535 14378589 ~ 14381681 (+)
G1260638 NA non-coding downstream 158783 14412837 ~ 14422434 (+)
G1260631 NA non-coding downstream 191097 14445151 ~ 14451109 (+)
G1260074 NA other upstream 289610 13961501 ~ 13961816 (+)
G1260013 NA other upstream 381196 13869315 ~ 13870230 (+)
LOC110490824 LOC106590516 other upstream 493224 13746336 ~ 13758266 (+)
armc3 armc3 other upstream 770555 13459209 ~ 13480871 (+)
G1260745 NA other downstream 412605 14666659 ~ 14668539 (+)
LOC110489673 LOC106590441 other downstream 651366 14905377 ~ 14914892 (+)
G1260946 LOC106590444 other downstream 766938 15020992 ~ 15022053 (+)
LOC110489660 pan3 other downstream 938958 15166247 ~ 15194945 (+)

Expression


Co-expression Network