Item | Value |
---|---|
gene id | LOC100653457 |
gene name | LOC106579454 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 14436122 ~ 14453602 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
transferrin receptor protein 1 isoform X2 |
id | description |
---|---|
K06503 | TFRC, CD71; transferrin receptor |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036943814.1 | False | 4339 | mRNA | 0.48 | 17 | 14436122 | 14453547 |
XM_036943815.1 | False | 4321 | mRNA | 0.48 | 17 | 14436122 | 14453569 |
XM_036943812.1 | False | 4411 | mRNA | 0.48 | 18 | 14436122 | 14453602 |
XM_036943813.1 | True | 4451 | mRNA | 0.48 | 18 | 14436122 | 14453602 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110489646 | LOC105021982 | coding | downstream | 515 | 14412828 ~ 14435607 (-) |
LOC110490924 | LOC106590497 | coding | downstream | 29910 | 14394884 ~ 14406212 (-) |
LOC110489643 | LOC106590492 | coding | downstream | 90702 | 14337050 ~ 14345420 (-) |
LOC110489642 | LOC106590491 | coding | downstream | 100317 | 14324774 ~ 14335805 (-) |
LOC110489639 | LOC106590487 | coding | downstream | 139722 | 14274348 ~ 14296400 (-) |
LOC118938790 | LOC106596271 | coding | upstream | 6651 | 14460253 ~ 14461905 (-) |
LOC118938789 | LOC106596271 | coding | upstream | 22684 | 14476286 ~ 14478272 (-) |
LOC110489648 | sh3k1 | coding | upstream | 54825 | 14508427 ~ 14545697 (-) |
qtrt2 | qtrt2 | coding | upstream | 214947 | 14666658 ~ 14692839 (-) |
LOC110489680 | zdhhc23 | coding | upstream | 277579 | 14731181 ~ 14741129 (-) |
G1261250 | NA | non-coding | downstream | 63325 | 14371482 ~ 14372797 (-) |
G1261233 | NA | non-coding | downstream | 71252 | 14364566 ~ 14364870 (-) |
G1261226 | NA | non-coding | downstream | 71782 | 14363326 ~ 14364340 (-) |
G1261141 | eif2s3 | non-coding | downstream | 128383 | 14306962 ~ 14307739 (-) |
G1261189 | NA | non-coding | downstream | 132836 | 14265027 ~ 14303286 (-) |
G1261237 | LOC106596271 | non-coding | upstream | 6205 | 14459807 ~ 14478227 (-) |
G1261239 | NA | non-coding | upstream | 45612 | 14499214 ~ 14500667 (-) |
G1261243 | NA | non-coding | upstream | 70879 | 14524481 ~ 14525528 (-) |
G1261294 | NA | non-coding | upstream | 85500 | 14539102 ~ 14587634 (-) |
msl2b | LOC106590518 | other | downstream | 720041 | 13708013 ~ 13716136 (-) |
G1260265 | NA | other | downstream | 897914 | 13537070 ~ 13538208 (-) |
G1260226 | LOC106590529 | other | downstream | 930961 | 13462865 ~ 13505161 (-) |
G1261562 | NA | other | upstream | 624108 | 15077710 ~ 15080745 (-) |
G1261529 | rpl21 | other | upstream | 644438 | 15096280 ~ 15098716 (-) |