LOC110489651 (ccdc191)


Basic Information

Item Value
gene id LOC110489651
gene name ccdc191
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 14692257 ~ 14731090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562395.2
CAGCAGAACAGCATGGAGCTAGCTACATCACTTTTGGATTAGCTTCAGATACCTATTTCAGTGCAAAATTAGACTTCTAACTAAGTATTTTTTTAGCTAGTGCTATGAGTAGTTAATATAAATTATGTAGCAAGTAAAATTGTATTCCTCTGTATTAATTCGGTAATAAGTGGCAGCTAATTTGGCGTCAGAAATGGCATACTCACATAACCCTGATATTTTTCGCTGGAAAAGAGTTACTAAGACTAAAAAACCCACTGCAGATAAGGTGCAGCTCAATAATGGGGAGATCAACCAATGGATGAAGACAGTGGAAATGGCCTCAGACTTTGCAGTGACTGAGGTTTTTTCCCTGAAGAAGCCCCATTCAGTGATAAGCAGTCAGTCAATGGCACTATACAGCACAGAGCAGCTGCTGGATCATGACCAAGCATACGGGgaagCCCAGGCTCTTCTTAGTGATTGGATGAACAGCAAGTTGCGTCTGGAAttggagatggaggaagaggaggatgtgatTGTCTCCCCTGAGAAGAACAGTCCAGAAGCCATGCCACCTGCCCAGCCTGTCTCCCTGGACTACAGCAACTTTGATGACCTGTATTCCCACCTggctgaggaagaggagagctCAGCGGTTAACAACTTCCTTCAAGACCTCATGGAGCGGGAAGTGGTGGATTCTGGGATAGTGGAAGATCTGGCACTAGACTCTGAAGAGCGAgacaggaggatgaggagggaccCGAGCCTCACCATGGAGGCACGTCACCGACAGGTGCGTGAGAACCGTGCACGGCGGGACGCGGAGCGGGAGAGGTTGCACAGGGAAAGGGTGGCGCGGAGGCAGGCCAGGGAGGAGGCGCagaggagggagcagggggaggagaggcgGAGGAGGCAGGAGGCACGCAGGCAGGAGGAGATGGTGCAGCAGGAGATGGTGCGACTGCGCCGcgagacggaggagaggaggaacctGGAGCAACTAGCCAGGCAAATggagagggagaggatcgcTAGGAAGACGGCAGCTAAGAGCTCACTGGTACTCCAGCCAGGCCCTTCATTCTCTACTGCACAGAAACAACGTGACACTGAGAGACCACTCAGACTACAGCAAGTAGAGGTCAGGGTTCAGATGCACAACCTTAAGtgtctgcAGAGGCACTTCTCTGGCTGGTACTCAGTGCTGTTGGAGAGGAGGTTGCAGATGGGCAAGGCGGCAGCGCTCTGTGATTGGAGGAACCAGCTGAGGGCGTGGCGAGACTGGCAGGCGCTGGTGTGGGCAGGGCGAGAGCAGCGGGAAgcggagagaacagaggaggagttaCGGACCCAGAAAAGACGCTGCCAGGTGGCAATGGTGAGTGACCGGAGGCGTTTGCTAAGACGATGCCTGAGTGATTGGCGGCTGTGGTGTCGGGCGGAGAGAGAACGCCGGGAGCTGTTGTCACAGCAGCAAGAGACGCGGCGCAAGATGGCCGCCCTGATTAATGCCGTGGCAACTGGGAAACTCAAGATGATGGAGGAGACGCATACTCCtgagccaatcactgccctaCCTGAGCCTTCTGACCAATCAGAAACCGTAGAACTGAAAGGTCAGCCAGGGTCACAACCTGCTggccccaccccctctccttcctgtcaAGGGGACGGACCGCTGGGGGCTGTGGTCCTGCACACCCTCCCCTGGCAGGTGACAAGGCGTAACGCGGCGCTGAGTGCAGGCGAGCTGAGGCGAGCACGGGAGAGGGGCGAGGTGGGCGATGGGGACGACAGTGTGGGTGCTGCCCCCCGGTCTCATACAGCAGCGGTGTGTGGGGGCCGGTTCGAGCATCGCCATGCCAGCCAGCAGCAGACCATTGCAGAGCAGAGGAAGCTCCTCAGGGAGCAACAGGAGCAGATCGCACGGCTCCAGGAGGAGCAGAGCATGATGGGACTGAGGCAGGAGGCCCAGACAGCCGCCCAGATCGCTGTCCCAGCATCCCCAAGGCCCAGAGGGATGACCTCTGACCCCAAAGAATCCAGGGCTGGAAGAGTCGCTCGGGGGAACGATGGCCGTTTCTCGGCCTACAGGAAACCAGCTGTCCGTCAGCAATGTCGTCATCCCACTGTCATGGcCATGGAGGAACGTGCTCGTCAGCGAGCGGAGCgcaggagggaggtggaggagctgaagagaaagaaggaggaggagaggctgGCCCAGCTGAAaacagcagtgaaggagaggcagagggaggaggaggatgagaaacGTAGAGCAgtggaaaggaggagggaggagaagagacgagagagagagAGGGAGCAGGAGAAACAGTGGAGGTTGGAGCGAGACCAGCAGCTCCAGACCCAGGCCCAGCAACACTACCACAGAACTATTTTACTACGGCGAGGCCTGGAGCCATGGAAACGCCTAGTCGCCCAGAGCCAAGCCAACACTCAGCTGGCCAGGGCTCATCACAGGCAGTCCCTCCTGAGACGGTGCACGCTGTCCTGGCAGCAGGTAGCAGGCGAGTCCCTGGCTCAGAAATGGGCCTCTGCCGACCAACTGCATCAACACATCCTGCTACGGAGGAGCCTGGGCAACTGGAAAAGGCTGAAGGATCACTGCATGGTTCTGGAGGGGCGGGCCGAGCGGTTCTGGCGCACGCATACTCTGAAGAGGGCTCTGATTGGACTGCTAGATCACGTGACCCAGGAGAGGATGGCAGATTGGGATCGGGAGCAGCAGGCTCAGGAACACAGTACCAGGCGGGTGGTGCGGAGCTGTTTCCAAGCCTGGAGACGGTATCCGGGGTGGCTgcgtgaggagagagggagggagaccagGAGGGAGCAGCTGAGACGCCGAGTGGCAGAGGTCCTCCCTGACTTCTGCTCttctcctctggactgtacctGGGAACAAGGCCCTCTGTgacccacagaacacacacatgtacagtagACATACGTACAgtacactcagacagacaggcaggcaggcagagaatACTGGCATAGAGGATAAATCAGTGGATAGGACCCAAAGCAGATGATTAAGTTGCTGCTGTAACAAGCACACACATACCAGCTG

Function

symbol description
ccdc191 Is expressed in several structures, including axis; head mesenchyme; mesoderm; musculature system; and pronephric duct. Orthologous to human CCDC191 (coiled-coil domain containing 191).

NR:

description
PREDICTED: coiled-coil domain-containing protein KIAA1407 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562395.2 True 3088 mRNA 0.57 18 14692257 14731090

Neighbor

gene id symbol gene type direction distance location
LOC110490825 LOC106590468 coding upstream 79613 14577442 ~ 14612644 (+)
si:ch211-161h7.8 kat coding upstream 128517 14553835 ~ 14563740 (+)
LOC110489645 LOC106590496 coding upstream 317277 14368162 ~ 14374980 (+)
LOC110489644 NA coding upstream 329313 14360048 ~ 14362944 (+)
apodb apod coding upstream 336007 14351818 ~ 14356250 (+)
LOC110489676 LOC106590472 coding downstream 49753 14780843 ~ 14796347 (+)
LOC110489674 LOC106590469 coding downstream 65758 14796848 ~ 14808166 (+)
LOC110489673 LOC106590441 coding downstream 174287 14905377 ~ 14914892 (+)
LOC110489671 LOC100195752 coding downstream 293727 15024817 ~ 15049542 (+)
LOC110489669 LOC106590445 coding downstream 319195 15050285 ~ 15075129 (+)
G1260770 qtrt2 non-coding upstream 961 14690749 ~ 14691296 (+)
G1260745 NA non-coding upstream 23718 14666659 ~ 14668539 (+)
G1260703 NA non-coding upstream 104623 14538908 ~ 14587634 (+)
G1260698 NA non-coding upstream 166748 14524283 ~ 14525509 (+)
G1260772 NA non-coding downstream 1100 14732190 ~ 14732328 (+)
G1260805 LOC106590473 non-coding downstream 13564 14744654 ~ 14746408 (+)
G1260818 NA non-coding downstream 27841 14758931 ~ 14759557 (+)
G1260842 LOC106590470 non-coding downstream 84078 14815168 ~ 14815425 (+)
G1260843 NA non-coding downstream 84402 14815492 ~ 14815824 (+)
LOC110489635 LOC106590481 other upstream 476328 14186442 ~ 14217437 (+)
G1260074 NA other upstream 730441 13961501 ~ 13961816 (+)
G1260013 NA other upstream 822027 13869315 ~ 13870230 (+)
G1260946 LOC106590444 other downstream 289902 15020992 ~ 15022053 (+)
LOC110489660 pan3 other downstream 461922 15166247 ~ 15194945 (+)
LOC110489686 LOC106590396 other downstream 965835 15696896 ~ 15706601 (+)
G1261980 NA other downstream 1004840 15735930 ~ 15736417 (+)

Expression


Co-expression Network