ggh (LOC106590426)


Basic Information

Item Value
gene id ggh
gene name LOC106590426
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 16716150 ~ 16719709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562494.2
ccttctccaatgggttttgagaaagaGATGAGGACGCCAGCTCTATGCAATTGAGCTCTTCCTCGTGAGAAACATAAACTGTATGCAACCTATAGCAATGTACTAGTTTCCAGTGTCATCAAGTCATCTTTAGACGGAGAAGCTCGTTAAATTTTTTTACAATACCAATTTGATCCACACGTGGAAACACGTTTCGGAAATGAGCAATTTTGCCCTACTGTTTTGTTTTGGTTTCTCAACTTTGTCCTCGTGCACAGCGCTGAAGAGGAACGACGAGCCTATTATCGGTGTTTTAGCGCAGGAGGTATACTCGCCTCGACCGCAGAATGCGTCTTATATAGCCGCATCGTATGTCAAGTTCCTGGAGTCTGCTGGAGCAAGAGTCGTCCCTGTGATGATAAATAAGACACTGGAAGAGTACAAAACACTGTTCAACTCCATTAATGGAATACTCTACCCTGGTGGTGGTGTTAGCATCCTCACATCTGGGTATGCAAAGGCTGCTAGAATCTTTTATGAGCTTGCCATAGAGGCCAACTCAAGGGGTGACTATTTCCCTGTATGGGGCACGTGTCTTGGATTCGAGGAACTGACGTACCTGACCAGTGGAAAGATGCTTCTGTCCCACACCAATACCAGTGGTGTGGCATTGCCACTGGTGTTTACTAACAGATCAAGAGAGAGTAGGATGTTCAAGGGCTTCCCATCAGAGGTCCTGGATGCCCTGGCCTCTGAGCCAATCACTGAAAACTCCCATAAATGGAGTCTCACTTTGGCGATTTATAACAGCAATGCAGACCTTAGGAAGTTCTACAAAGTCCTGACCACAAGCAGCGATGGGATAAACGAGTTTGTGTCAACTATGGAAGCATATGGCTTCCCCATCTATGGAACCCAATGGCACCCTGAAAAGAATGCATTTGAATGGACAAAGACGTACATTCCACACTCTCCATTGGCTGTAAAGGTTACTTTCTTCATGGCCGATTTCTTTGTCAATGAAGCTAGAAAAAACTTTCACAAATTTgaggatgaggaggtggagaagagggCACTGATATATAACTACAATCCTGTGTACATTGGAATCAAGTCTGCCTTTGAACAAATATATTACTTTTGAAATGAGTGTctttttgatattttaagtagaaattgtggacaaatattgaattttaaaagcctgttattaATAACTATTGATTTTTTTATATTAATAAAGACTTGCTGAATTGCCAAAGATGCCCTCTGTGcatcctctgtgacttctaggaagatgttaatccacttaaccccaacatttctccaagttcaccatcattgtaaagccctagttattttgttgcttgagtcatttctgaagattatttatttaatgttattAGTAATTTATTTTAAGGTGaagaaaggaaaaaaaaaacTCCCACATTTTCAGGTCAActctgttacttgaactgaactcttgatttccccccccccccgagacaTTGCATATCTCATTGTCAAGtcagtgtaaaagcaggtgagctggttctactcttttaaCCCATGTTCTGGTGTTTGGTGGTGAAAAACTGAGCAGGTCGAGCACAACACTTCAAACCTGTTACCCATAGATGGTCAGGCTGGAAAGGTTATAACAATGTTTTTTTGTGAAGTTTGaattcaattgcccctccctgttgtacacaacaagcttccattccccctgtcacaaataaatgtatggctgatttaagataaggtagtcaaccctgttactttatttggcactatagttttttatttaacctcttgagatggggaaATATGTTtcattaagttgaacatgtgctctttatgaaaTAAGTTAAATAAGTTAATAAGTTAAaataagttaaataaaataaatcaaactACTCAAAACGAACctaattggtggaacgacccaaaTTATTGTTCTTAATGGTACTGATATAAACCTACAATCCTGTTCACTGGAATCAAGTCTGCCTTTGAACAATATTACTTTTTTGTGAGTATgtaatttaacatttttatttcattcattGTAATGGTATTTTGCAGCAACACTTCGATGTACATTTCTGTAAATTAAAAGCTTAATGTTTGATTTGTATATTTTGGATAAAGGTTTTACAAAGAAAGTAGGCTAACTGAGAACAATAAAGTTGTTTGTATGACTA
>XM_036943909.1
TACATCATGTATTTATTATAAATAGTTCCCTATATCATTAACACTGCCTAATAGATGATTATGTGAGATTAGAACTTTGCATAACTAGTTCGACCTCTTCAAAGTCCGGTCTGATATCAAAAACATCAACCATATGGCTACAATTAGTCCTCAGAATGATAGGTGTTTTAGCGCAGGAGGTATACTCGCCTCGACCGCAGAATGCGTCTTATATAGCCGCATCGTATGTCAAGTTCCTGGAGTCTGCTGGAGCAAGAGTCGTCCCTGTGATGATAAATAAGACACTGGAAGAGTACAAAACACTGTTCAACTCCATTAATGGAATACTCTACCCTGGTGGTGGTGTTAGCATCCTCACATCTGGGTATGCAAAGGCTGCTAGAATCTTTTATGAGCTTGCCATAGAGGCCAACTCAAGGGGTGACTATTTCCCTGTATGGGGCACGTGTCTTGGATTCGAGGAACTGACGTACCTGACCAGTGGAAAGATGCTTCTGTCCCACACCAATACCAGTGGTGTGGCATTGCCACTGGTGTTTACTAACAGATCAAGAGAGAGTAGGATGTTCAAGGGCTTCCCATCAGAGGTCCTGGATGCCCTGGCCTCTGAGCCAATCACTGAAAACTCCCATAAATGGAGTCTCACTTTGGCGATTTATAACAGCAATGCAGACCTTAGGAAGTTCTACAAAGTCCTGACCACAAGCAGCGATGGGATAAACGAGTTTGTGTCAACTATGGAAGCATATGGCTTCCCCATCTATGGAACCCAATGGCACCCTGAAAAGAATGCATTTGAATGGACAAAGACGTACATTCCACACTCTCCATTGGCTGTAAAGGTTACTTTCTTCATGGCCGATTTCTTTGTCAATGAAGCTAGAAAAAACTTTCACAAATTTgaggatgaggaggtggagaagagggCACTGATATATAACTACAATCCTGTGTACATTGGAATCAAGTCTGCCTTTGAACAAATATATTACTTTTGAAATGAGTGTctttttgatattttaagtagaaattgtggacaaatattgaattttaaaagcctgttattaATAACTATTGATTTTTTTATATTAATAAAGACTTGCTGAATTGCCAAAGATGCCCTCTGTGcatcctctgtgacttctaggaagatgttaatccacttaaccccaacatttctccaagttcaccatcattgtaaagccctagttattttgttgcttgagtcatttctgaagattatttatttaatgttattAGTAATTTATTTTAAGGTGaagaaaggaaaaaaaaaacTCCCACATTTTCAGGTCAActctgttacttgaactgaactcttgatttccccccccccccgagacaTTGCATATCTCATTGTCAAGtcagtgtaaaagcaggtgagctggttctactcttttaaCCCATGTTCTGGTGTTTGGTGGTGAAAAACTGAGCAGGTCGAGCACAACACTTCAAACCTGTTACCCATAGATGGTCAGGCTGGAAAGGTTATAACAATGTTTTTTTGTGAAGTTTGaattcaattgcccctccctgttgtacacaacaagcttccattccccctgtcacaaataaatgtatggctgatttaagataaggtagtcaaccctgttactttatttggcactatagttttttatttaacctcttgagatggggaaATATGTTtcattaagttgaacatgtgctctttatgaaaTAAGTTAAATAAGTTAATAAGTTAAaataagttaaataaaataaatcaaactACTCAAAACGAACctaattggtggaacgacccaaaTTATTGTTCTTAATGGTACTGATATAAACCTACAATCCTGTTCACTGGAATCAAGTCTGCCTTTGAACAATATTACTTTTTTGTGAGTATgtaatttaacatttttatttcattcattGTAATGGTATTTTGCAGCAACACTTCGATGTACATTTCTGTAAATTAAAAGCTTAATGTTTGATTTGTATATTTTGGATAAAGGTTTTACAAAGAAAGTAGGCTAACTGAGAACAATAAAGTTGTTTGTATGACTA

Function

NR:

description
gamma-glutamyl hydrolase-like

GO:

id name namespace
GO:0006760 folic acid-containing compound metabolic process biological_process
GO:0006541 glutamine metabolic process biological_process
GO:0034722 gamma-glutamyl-peptidase activity molecular_function

KEGG:

id description
K01307 GGH; gamma-glutamyl hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562494.2 False 2186 mRNA 0.39 9 16716150 16719709
XM_036943909.1 True 2061 mRNA 0.38 9 16716475 16719709

Neighbor

gene id symbol gene type direction distance location
LOC100136240 LOC100136240 coding upstream 29502 16680278 ~ 16686648 (+)
LOC110489709 anks6 coding upstream 57667 16630112 ~ 16658483 (+)
LOC110489708 LOC106590383 coding upstream 222961 16464241 ~ 16493189 (+)
LOC110489703 LOC106590416 coding upstream 404364 16229826 ~ 16311952 (+)
LOC110490826 LOC106590409 coding upstream 528411 16184122 ~ 16187739 (+)
LOC118938946 NA coding downstream 509041 17228750 ~ 17230560 (+)
LOC110490933 LOC106590429 coding downstream 524448 17244157 ~ 17472962 (+)
LOC110489719 LOC106590432 coding downstream 817586 17537295 ~ 17641808 (+)
LOC110489724 LOC106590359 coding downstream 1270136 17989845 ~ 18092131 (+)
dnah5l LOC106590358 coding downstream 1381978 18101687 ~ 18171361 (+)
G1263064 NA non-coding upstream 37979 16677946 ~ 16678171 (+)
G1263063 NA non-coding upstream 38846 16676866 ~ 16677304 (+)
G1263053 NA non-coding upstream 55833 16660072 ~ 16660317 (+)
G1263052 NA non-coding upstream 56753 16659190 ~ 16659397 (+)
G1263042 NA non-coding upstream 57235 16658565 ~ 16658915 (+)
G1263105 NA non-coding downstream 41528 16761237 ~ 16761713 (+)
G1263874 NA non-coding downstream 638866 17358575 ~ 17358854 (+)
G1263880 NA non-coding downstream 649725 17369434 ~ 17369726 (+)
G1263881 NA non-coding downstream 652455 17372164 ~ 17372401 (+)
G1263885 NA non-coding downstream 659792 17379501 ~ 17379715 (+)
mcmdc2 mcmdc2 other upstream 821986 15885437 ~ 15895996 (+)
G1261980 NA other upstream 979733 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 1009611 15696896 ~ 15706601 (+)
LOC110489660 pan3 other upstream 1521205 15166247 ~ 15194945 (+)
G1260946 LOC106590444 other upstream 1694097 15020992 ~ 15022053 (+)
LOC110489737 LOC106590377 other downstream 2140402 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 2954404 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 4120586 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 5066512 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 6413150 23132828 ~ 23146739 (+)

Expression


Co-expression Network