actr3b (LOC106590428)


Basic Information

Item Value
gene id actr3b
gene name LOC106590428
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 17207282 ~ 17226440 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036943911.1
GGCCCATCAGACATGGGATGGTGGAAGACTGGGATTTGATGGAGAAGTTCATGGAGCAGATCATCTTCAAGTATCTGCGGGCAGAGCCTGAAGACCATAGCTTCCTTATGAGCCTCCGTTGAACACGCCAGAGAACAGAGAGTATCTGGCTGAGATCATGTTTGAGACCTTTAATGTCCCAGGCCTGTACATCGCAGTGCAGGCAGTTCTAGCCCTGGCAGCATCATGGACGTCTAGACAAGTAGGCGAGCGAACACTGACAGGAATCGTGATTGACAGCGGAGATGGAGTCACCCACGCCATACCTGTGGCTGAAGGCTACGTCATTGGGAGCTGTATAAAACACATCCCCATAGCAGGTCGAGACATCACCTTGTTTATTCAGCAGCTCCTCAGAGAAAGGGAGGTGGGCATCCCCCCGGAACAGTCCATGGAGACAGCCAAGGCAGTCAAGGAGAGGTACTGCTACATCTGTCCAGACATTGTGAAGGAATTTGCCAAATATGACACGGACCCTGGGAAATGGATCAAGAAGTACAAAGGCATCAATGCCATCAACAAATCTGAATTCCACATAGATGTTGGATATGAACGCTTTTTAGGTCCAGAAATATTCTTTCATCCAGAGTTTGCCAACCCAGACTTCACGCAGCCAATCTCAGATATAGTTGACGAGGTTATAATGAACTGTCCAATAGATGTCAGAAGACCTCTATATAAGAATATTGTCCTGTCTGGCGGTTCCACCATGTTCAGAGACTTTGGCCGGCGGCTGCAGAGAGACCTGAAGCGGTCGGTAGACGCCCGGCTCAAATTGAGTGAGGAGCTCAGTGGAGGAAGGATAAAGCCCAAGCCCATGGAGGTCCTGGTGGTTACACACCACATGCAGCGCTATGCCGTGTGGTTTGGAGGATCCATGCTTGCCTCTACGCCTGAGTTTCTCCAGGTTTGTCACTCAAAAAAGGACTACGATGAGTTTGGTCCCAGCATCTGCCGCCATAACCCTGTCTTTGGTACCATGTCCTAATGCTAAAACCCACACCTACAGAACCTGCTGTTGACCCCGGCCTGGGGTCAGTCCATGCATCGTGATTGATGTCCTTACTTTACCACCATAGCACTCTAACCTACCACACAAGAGCCCCTTAGACGTTGATGTGCAATTGAATTTGTCAACAATATATTGTACAATCAGTATCGGCTAATTAGAATTCATGTGAAAGGATAAAAGTCATTGAATTAGACAAAGACCTCTTATAGCACTCATACAGTGAATTTTCAATATTGTCATTGTAGCAACATTGCAGACTATTTAATAGAATTAAACAAGAAAAAATCTAAACTGGAACACTTTGTTTGAAGCCATGAACTGAAGACTGTTTTCTTGCACCTACTCTCTTAGTTTCGCTGTACACTCTTAAGATTAACTTTAGATCCCATCCCAGGCTGCATGAATCATGTGGGAAGGCAACCCACGCTAATTCTGGAGCAGCCCAAGTTACATTTGTCCAATATCCATAGAAAGTCATGCTTTGAAAttgtatataaaatatatagataAAGATACTATATATTACAATATAACATATTTAGAAAtgtgtttatatttatattaaagATTATCAGAACAGGTATATAAAGATGTAGATCGTATTGAGGTGAAATAGTGTAACGTGAAAGAAGAGATATTTGGAGAGATTTTGTTTATTAGGTCCAAAAGTATTTATTAAATTATTTTTGTCAGCCACAAATTATCTATGGTATATAGATATATTGAagtatttatttatacatttctgTGTAAGTTATTTCCGTAGGGAACTGTGCTCACTAAAAATCAAACTGCTGTATGACGCTAATGTGAATAAAGGTACTTGGCACCTTCA
>XM_021562501.2
GAGCGGCCACTtgagtatctggtcaatataatAGATACTCTGTAATATAAATAACGGTACAGGGAAATAAGCGAGCACGGGGCAGTGCAATCAGCCGTGTAGCCAACCTTCAATCATACATTGGGTTTAAACTAGCCGATACAGTTGTTGCAAATAATCTATGGTGTTCTAGTATCGATAGGACAATCGTCAACACGAGCATGGCAACTCCTCTACCTCCTTGCGTGATAGATTGTGGGACAGGATACACCAAGATTGGATATGCTGGAAACACAGAGCCACAGTTTATCATGCCATCCTGCATCGCTATACGAGAGTCAGCCGGTGTAGGAGACCAGGCACAGAGGCGACTTGCGAAGGGAGTGGATGACTTGGATTTCTTTATAGGAGATGAAGGCATTGATAAGCCCAACTATGCAACCAAGTGGCCCATCAGACATGGGATGGTGGAAGACTGGGATTTGATGGAGAAGTTCATGGAGCAGATCATCTTCAAGTATCTGCGGGCAGAGCCTGAAGACCATAGCTTCCTTATGACAGAGCCTCCGTTGAACACGCCAGAGAACAGAGAGTATCTGGCTGAGATCATGTTTGAGACCTTTAATGTCCCAGGCCTGTACATCGCAGTGCAGGCAGTTCTAGCCCTGGCAGCATCATGGACGTCTAGACAAGTAGGCGAGCGAACACTGACAGGAATCGTGATTGACAGCGGAGATGGAGTCACCCACGCCATACCTGTGGCTGAAGGCTACGTCATTGGGAGCTGTATAAAACACATCCCCATAGCAGGTCGAGACATCACCTTGTTTATTCAGCAGCTCCTCAGAGAAAGGGAGGTGGGCATCCCCCCGGAACAGTCCATGGAGACAGCCAAGGCAGTCAAGGAGAGGTACTGCTACATCTGTCCAGACATTGTGAAGGAATTTGCCAAATATGACACGGACCCTGGGAAATGGATCAAGAAGTACAAAGGCATCAATGCCATCAACAAATCTGAATTCCACATAGATGTTGGATATGAACGCTTTTTAGGTCCAGAAATATTCTTTCATCCAGAGTTTGCCAACCCAGACTTCACGCAGCCAATCTCAGATATAGTTGACGAGGTTATAATGAACTGTCCAATAGATGTCAGAAGACCTCTATATAAGAATATTGTCCTGTCTGGCGGTTCCACCATGTTCAGAGACTTTGGCCGGCGGCTGCAGAGAGACCTGAAGCGGTCGGTAGACGCCCGGCTCAAATTGAGTGAGGAGCTCAGTGGAGGAAGGATAAAGCCCAAGCCCATGGAGGTCCTGGTGGTTACACACCACATGCAGCGCTATGCCGTGTGGTTTGGAGGATCCATGCTTGCCTCTACGCCTGAGTTTCTCCAGGTTTGTCACTCAAAAAAGGACTACGATGAGTTTGGTCCCAGCATCTGCCGCCATAACCCTGTCTTTGGTACCATGTCCTAATGCTAAAACCCACACCTACAGAACCTGCTGTTGACCCCGGCCTGGGGTCAGTCCATGCATCGTGATTGATGTCCTTACTTTACCACCATAGCACTCTAACCTACCACACAAGAGCCCCTTAGACGTTGATGTGCAATTGAATTTGTCAACAATATATTGTACAATCAGTATCGGCTAATTAGAATTCATGTGAAAGGATAAAAGTCATTGAATTAGACAAAGACCTCTTATAGCACTCATACAGTGAATTTTCAATATTGTCATTGTAGCAACATTGCAGACTATTTAATAGAATTAAACAAGAAAAAATCTAAACTGGAACACTTTGTTTGAAGCCATGAACTGAAGACTGTTTTCTTGCACCTACTCTCTTAGTTTCGCTGTACACTCTTAAGATTAACTTTAGATCCCATCCCAGGCTGCATGAATCATGTGGGAAGGCAACCCACGCTAATTCTGGAGCAGCCCAAGTTACATTTGTCCAATATCCATAGAAAGTCATGCTTTGAAAttgtatataaaatatatagataAAGATACTATATATTACAATATAACATATTTAGAAAtgtgtttatatttatattaaagATTATCAGAACAGGTATATAAAGATGTAGATCGTATTGAGGTGAAATAGTGTAACGTGAAAGAAGAGATATTTGGAGAGATTTTGTTTATTAGGTCCAAAAGTATTTATTAAATTATTTTTGTCAGCCACAAATTATCTATGGTATATAGATATATTGAagtatttatttatacatttctgTGTAAGTTATTTCCGTAGGGAACTGTGCTCACTAAAAATCAAACTGCTGTATGACGCTAATGTGAATAAAGGTACTTGGCACCTTCA
>XM_021562502.2
AGAGCGGCCACTtgagtatctggtcaatataatAGATACTCTGTAATATAAATAACGGTACAGGGAAATAAGCGAGCACGGGGCAGTGCAATCAGCCGTGTAGCCAACCTTCAATCATACATTGGGTTTAAACTAGCCGATACAGTTGTTGCAAATAATCTATGGTGTTCTAGTATCGATAGGACAATCGTCAACACGAGCATGGCAACTCCTCTACCTCCTTGCGTGATAGATTGTGGGACAGGATACACCAAGATTGGATATGCTGGAAACACAGAGCCACAGTTTATCATGCCATCCTGCATCGCTATACGAGAGTCAGCCGGTGTAGGAGACCAGGCACAGAGGCGACTTGCGAAGGGAGTGGATGACTTGGATTTCTTTATAGGAGATGAAGGCATTGATAAGCCCAACTATGCAACCAAGTGGCCCATCAGACATGGGATGGTGGAAGACTGGGATTTGATGGAGAAGTTCATGGAGCAGATCATCTTCAAGTATCTGCGGGCAGAGCCTGAAGACCATAGCTTCCTTATGGCAGTTCTAGCCCTGGCAGCATCATGGACGTCTAGACAAGTAGGCGAGCGAACACTGACAGGAATCGTGATTGACAGCGGAGATGGAGTCACCCACGCCATACCTGTGGCTGAAGGCTACGTCATTGGGAGCTGTATAAAACACATCCCCATAGCAGGTCGAGACATCACCTTGTTTATTCAGCAGCTCCTCAGAGAAAGGGAGGTGGGCATCCCCCCGGAACAGTCCATGGAGACAGCCAAGGCAGTCAAGGAGAGGTACTGCTACATCTGTCCAGACATTGTGAAGGAATTTGCCAAATATGACACGGACCCTGGGAAATGGATCAAGAAGTACAAAGGCATCAATGCCATCAACAAATCTGAATTCCACATAGATGTTGGATATGAACGCTTTTTAGGTCCAGAAATATTCTTTCATCCAGAGTTTGCCAACCCAGACTTCACGCAGCCAATCTCAGATATAGTTGACGAGGTTATAATGAACTGTCCAATAGATGTCAGAAGACCTCTATATAAGAATATTGTCCTGTCTGGCGGTTCCACCATGTTCAGAGACTTTGGCCGGCGGCTGCAGAGAGACCTGAAGCGGTCGGTAGACGCCCGGCTCAAATTGAGTGAGGAGCTCAGTGGAGGAAGGATAAAGCCCAAGCCCATGGAGGTCCTGGTGGTTACACACCACATGCAGCGCTATGCCGTGTGGTTTGGAGGATCCATGCTTGCCTCTACGCCTGAGTTTCTCCAGGTTTGTCACTCAAAAAAGGACTACGATGAGTTTGGTCCCAGCATCTGCCGCCATAACCCTGTCTTTGGTACCATGTCCTAATGCTAAAACCCACACCTACAGAACCTGCTGTTGACCCCGGCCTGGGGTCAGTCCATGCATCGTGATTGATGTCCTTACTTTACCACCATAGCACTCTAACCTACCACACAAGAGCCCCTTAGACGTTGATGTGCAATTGAATTTGTCAACAATATATTGTACAATCAGTATCGGCTAATTAGAATTCATGTGAAAGGATAAAAGTCATTGAATTAGACAAAGACCTCTTATAGCACTCATACAGTGAATTTTCAATATTGTCATTGTAGCAACATTGCAGACTATTTAATAGAATTAAACAAGAAAAAATCTAAACTGGAACACTTTGTTTGAAGCCATGAACTGAAGACTGTTTTCTTGCACCTACTCTCTTAGTTTCGCTGTACACTCTTAAGATTAACTTTAGATCCCATCCCAGGCTGCATGAATCATGTGGGAAGGCAACCCACGCTAATTCTGGAGCAGCCCAAGTTACATTTGTCCAATATCCATAGAAAGTCATGCTTTGAAAttgtatataaaatatatagataAAGATACTATATATTACAATATAACATATTTAGAAAtgtgtttatatttatattaaagATTATCAGAACAGGTATATAAAGATGTAGATCGTATTGAGGTGAAATAGTGTAACGTGAAAGAAGAGATATTTGGAGAGATTTTGTTTATTAGGTCCAAAAGTATTTATTAAATTATTTTTGTCAGCCACAAATTATCTATGGTATATAGATATATTGAagtatttatttatacatttctgTGTAAGTTATTTCCGTAGGGAACTGTGCTCACTAAAAATCAAACTGCTGTATGACGCTAATGTGAATAAAGGTACTTGGCACCTTCA
>XR_005036055.1
TAGAGCGGCCACTtgagtatctggtcaatataatAGATACTCTGTAATATAAATAACGGTACAGGGAAATAAGCGAGCACGGGGCAGTGCAATCAGCCGTGTAGCCAACCTTCAATCATACATTGGGTTTAAACTAGCCGATACAGTTGTTGCAAATAATCTATGGTGTTCTAGTATCGATAGGACAATCGTCAACACGAGCATGGCAACTCCTCTACCTCCTTGCGTGATAGATTGTGGGACAGGATACACCAAGATTGGATATGCTGGAAACACAGAGCCACAGTTTATCATGCCATCCTGCATCGCTATACGAGAGTCAGCCGGTGTAGGAGACCAGGCACAGAGGCGACTTGCGAAGGGAGTGGATGACTTGGATTTCTTTATAGGAGATGAAGGCATTGATAAGCCCAACTATGCAACCAAGTGGCCCATCAGACATGGGATGGTGGAAGACTGGGATTTGATGGAGAAGTTCATGGAGCAGATCATCTTCAAGTATCTGCGGGCAGAGCCTGAAGACCATAGCTTCCTTATGACAGAGCCTCCGTTGAACACGCCAGAGAACAGAGAGTATCTGGCTGAGATCATGTTTGAGACCTTTAATGTCCCAGGCCTGTACATCGCAGTGCAGGCAGTTCTAGCCCTGGCAGCATCATGGACGTCTAGACAAGTAGGCGAGCGAACACTGACAGGAATCGTGATTGACAGCGGAGATGGAGTCACCCACGCCATACCTGTGGCTGAAGGCTACGTCATTGGGAGCTGTATAAAACACATCCCCATAGCAGGTCGAGACATCACCTTGTTTATTCAGCAGCTCCTCAGAGAAAGGGAGGTGGGCATCCCCCCGGAACAGTCCATGGAGACAGCCAAGGCAGTCAAGGAGAGGTACTGCTACATCTGTCCAGACATTGTGAAGGAATTTGCCAAATATGACACGGACCCTGGGAAATGGATCAAGAAGTACAAAGGCATCAATGCCATCAACAAATCTGAATTCCACATAGATGTTGGATATGAACGCTTTTTAGGTCCAGAAATATTCTTTCATCCAGAGTTTGCCAACCCAGACTTCACGCAGCCAATCTCAGATATAGTTGACGAGGTTATAATGAACTGTCCAATAGATGTCAGAAGACCTCTATATAAGttgtgttgtgtactgacACATTACAGAATATTGTCCTGTCTGGCGGTTCCACCATGTTCAGAGACTTTGGCCGGCGGCTGCAGAGAGACCTGAAGCGGTCGGTAGACGCCCGGCTCAAATTGAGTGAGGAGCTCAGTGGAGGAAGGATAAAGCCCAAGCCCATGGAGGTCCTGGTGGTTACACACCACATGCAGCGCTATGCCGTGTGGTTTGGAGGATCCATGCTTGCCTCTACGCCTGAGTTTCTCCAGGTTTGTCACTCAAAAAAGGACTACGATGAGTTTGGTCCCAGCATCTGCCGCCATAACCCTGTCTTTGGTACCATGTCCTAATGCTAAAACCCACACCTACAGAACCTGCTGTTGACCCCGGCCTGGGGTCAGTCCATGCATCGTGATTGATGTCCTTACTTTACCACCATAGCACTCTAACCTACCACACAAGAGCCCCTTAGACGTTGATGTGCAATTGAATTTGTCAACAATATATTGTACAATCAGTATCGGCTAATTAGAATTCATGTGAAAGGATAAAAGTCATTGAATTAGACAAAGACCTCTTATAGCACTCATACAGTGAATTTTCAATATTGTCATTGTAGCAACATTGCAGACTATTTAATAGAATTAAACAAGAAAAAATCTAAACTGGAACACTTTGTTTGAAGCCATGAACTGAAGACTGTTTTCTTGCACCTACTCTCTTAGTTTCGCTGTACACTCTTAAGATTAACTTTAGATCCCATCCCAGGCTGCATGAATCATGTGGGAAGGCAACCCACGCTAATTCTGGAGCAGCCCAAGTTACATTTGTCCAATATCCATAGAAAGTCATGCTTTGAAAttgtatataaaatatatagataAAGATACTATATATTACAATATAACATATTTAGAAAtgtgtttatatttatattaaagATTATCAGAACAGGTATATAAAGATGTAGATCGTATTGAGGTGAAATAGTGTAACGTGAAAGAAGAGATATTTGGAGAGATTTTGTTTATTAGGTCCAAAAGTATTTATTAAATTATTTTTGTCAGCCACAAATTATCTATGGTATATAGATATATTGAagtatttatttatacatttctgTGTAAGTTATTTCCGTAGGGAACTGTGCTCACTAAAAATCAAACTGCTGTATGACGCTAATGTGAATAAAGGTACTTGGCACCTTCA

Function

NR:

description
actin-related protein 3B-like isoform X1

GO:

id name namespace
GO:0034314 Arp2/3 complex-mediated actin nucleation biological_process
GO:0005885 Arp2/3 protein complex cellular_component
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036943911.1 False 1886 mRNA 0.43 9 17207282 17224530
XM_021562501.2 False 2316 mRNA 0.43 12 17207282 17226438
XM_021562502.2 False 2221 mRNA 0.43 11 17207282 17226439
XR_005036055.1 True 2344 mRNA 0.43 12 17207282 17226440

Neighbor

gene id symbol gene type direction distance location
LOC110489714 LOC106590427 coding downstream 144390 16720067 ~ 17062892 (-)
LOC110490827 LOC106590390 coding downstream 504191 16695548 ~ 16703091 (-)
dph2 dph2 coding downstream 516756 16686641 ~ 16690526 (-)
LOC110489710 LOC106590425 coding downstream 526460 16667887 ~ 16680822 (-)
LOC118938791 NA coding downstream 589540 16612010 ~ 16617742 (-)
LOC110489717 LOC106590430 coding upstream 250524 17476964 ~ 17528010 (-)
bcl2a LOC106590353 coding upstream 435271 17661711 ~ 17728790 (-)
LOC110489721 LOC106590355 coding upstream 516209 17742649 ~ 17746298 (-)
LOC110489722 LOC106590357 coding upstream 524808 17751248 ~ 17756522 (-)
LOC118938947 NA coding upstream 870284 18096724 ~ 18097899 (-)
G1264090 NA non-coding downstream 4934 17201154 ~ 17202348 (-)
G1263575 NA non-coding downstream 298394 16875778 ~ 16908888 (-)
G1263464 NA non-coding downstream 466925 16693875 ~ 16740357 (-)
G1263458 NA non-coding downstream 541254 16665793 ~ 16666028 (-)
G1264153 NA non-coding upstream 126468 17352908 ~ 17353122 (-)
G1264154 NA non-coding upstream 127232 17353672 ~ 17353939 (-)
G1264156 NA non-coding upstream 129881 17356321 ~ 17356567 (-)
G1264157 NA non-coding upstream 130147 17356587 ~ 17356819 (-)
G1264158 NA non-coding upstream 132206 17358646 ~ 17358910 (-)
G1263444 NA other downstream 560865 16645644 ~ 16646417 (-)
G1262745 NA other downstream 930730 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 1172160 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 1362141 15821701 ~ 15845199 (-)
G1262503 NA other downstream 1399665 15806250 ~ 15807617 (-)
G1264199 LOC106590429 other upstream 235388 17461828 ~ 17462977 (-)
G1265249 NA other upstream 957351 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 1350099 18576539 ~ 18580163 (-)
G1266471 NA other upstream 1882119 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 2208578 19435018 ~ 19453770 (-)

Expression


Co-expression Network