crygn2 (LOC106590379)


Basic Information

Item Value
gene id crygn2
gene name LOC106590379
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18871226 ~ 18874224 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562584.2
CTCGCGATACTGCCGGGCACGCGCCCCGCCATATATATTGGGGTGTCCAACTTTTTTACTGTTACACTTTCTTACTTGTGGGCCAGGTTGGACAGTATCCAGTGGAAAATGTCGCAGTATTCTGGAAAGATCACCTTCTACGAGGGAAAATGCTTCACTGGCAGGCAGCTGGAGGTCAGGGGCGACTGCGATAACTTCCAGGACCGTGGCTTCATGAACCGCGTCAACTCCATCCGTGTGGAGAGCGGCGCCTTCCGCTGCTTCGACCACCCCGACTTCAAGGGACAGCAGTACATCCTGGAGCACGGCGAATACCCCGAGTTCCAGCGTTGGAACAGCCACAACGACCACATGGGCTCCTGTAAGCCCATCAAGATGCACGGTGAGCACTACAGAATGGAGCTGTTCGAGGCCTGTAACTTCTCCGGCCAGTGTGTGGAGATCTGTGATGACTGCCCCTTCCTGCAGAGCCGTGGCCTCAGCAAGAACTGCATCAACTCCATCAAGGTCTATGGAGACGGAGCCTGGGTGATGTATGAGGAGCCTAACTTCCGCGGCCGCATGTACATcgtggagagaggagactactGCAGTCACAACGAGTGGCAGGCCCAGAACCCCAACATCCAGTCCATCCGTAGGGTGGTCAACTACTTCTAAACCTCTTCTCCTATCCTGCCCGAGACCTCGACCCTGGCATGGACAGTGACTTTTACCACTACCGCTCTAGAAATGTTCAATAAAAAAAGACACCCCAAAAAAATCacacaaatgtatttttatcaAA

Function

NR:

description
gamma-crystallin N-B

GO: NA

KEGG:

id description
K23483 CRYG; gamma-crystallin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562584.2 True 787 mRNA 0.53 4 18871226 18874224

Neighbor

gene id symbol gene type direction distance location
xylb xylb coding downstream 22169 18786870 ~ 18849057 (-)
actriib actriib coding downstream 191173 18618670 ~ 18680053 (-)
LOC110489734 exog coding downstream 263722 18592996 ~ 18607504 (-)
LOC110489732 wdr48 coding downstream 487120 18373431 ~ 18384106 (-)
unm_hu7910 LOC106590366 coding downstream 501992 18325310 ~ 18369234 (-)
LOC110489739 LOC106590380 coding upstream 8582 18882806 ~ 18916856 (-)
LOC110490935 LOC106579657 coding upstream 44561 18918785 ~ 19220905 (-)
LOC110490936 lrrc30 coding upstream 361876 19236100 ~ 19237676 (-)
LOC110489741 LOC106590347 coding upstream 447801 19322025 ~ 19372405 (-)
LOC110489747 LOC106590340 coding upstream 840084 19714308 ~ 19718519 (-)
G1266325 NA non-coding downstream 10960 18859726 ~ 18860266 (-)
G1266320 NA non-coding downstream 20337 18850600 ~ 18850889 (-)
G1265547 NA non-coding downstream 135590 18735271 ~ 18735636 (-)
G1265464 NA non-coding downstream 188014 18667066 ~ 18683212 (-)
G1265454 LOC106579582 non-coding downstream 296277 18574667 ~ 18574949 (-)
G1266384 NA non-coding upstream 84000 18958224 ~ 18959762 (-)
G1266411 NA non-coding upstream 122750 18996974 ~ 18998548 (-)
G1266424 NA non-coding upstream 142005 19016229 ~ 19083858 (-)
G1266457 NA non-coding upstream 203932 19078156 ~ 19078815 (-)
G1265456 LOC106590371 other downstream 291063 18576539 ~ 18580163 (-)
G1265249 NA other downstream 687103 18183791 ~ 18184123 (-)
G1264199 LOC106590429 other downstream 1408249 17461828 ~ 17462977 (-)
G1263444 NA other downstream 2224809 16645644 ~ 16646417 (-)
G1262745 NA other downstream 2594674 16276009 ~ 16276552 (-)
G1266471 NA other upstream 234335 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 560794 19435018 ~ 19453770 (-)
G1267414 NA other upstream 1393742 20267966 ~ 20268488 (-)
G1267452 NA other upstream 1416126 20290350 ~ 20290673 (-)
G1268555 LOC106590243 other upstream 2084148 20958372 ~ 20960089 (-)

Expression


Co-expression Network