LOC110489759


Basic Information

Item Value
gene id LOC110489759
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20556772 ~ 20566859 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002468618.2
AAAATGAAATGCACCTAGCTACATTCGTATTGTAGCCTACTCAGTCGGTGCAAAACAGAAACAAGTAATTTCTCATCACATCGTGCATTTTAGTTTGCATTGAGAAGTTTGGTGTTATAGATATATCCACACCCTACCTACCTTGTCCAGCGCTGGATGGTCTATCACTTCTTAAACACATAGGATTACTTAATGTACACACCGGTCTTCTTGTGTGTCTGCAAATCATTTGTAAACAGCAGAACCAGTCCTTCCAGACAGTCTACTTTTCAAGGAACTGGAAGGACTGCATTCTAGATGTTTCCAATTTCCAGGCCATTCCGCAATTTTCAACTCCAATGAGAGACAACACATGCTGAAATGGCTGTTTAGGTAAAGTAAGGAATTGGTAAGTGATGATTTTAAATGCTGTCTCAGATAAAATGGACGATTTGTGGTAGATAAGGATTTGCCTTTGTAAAAAGCAGGAAGCTTGTGTGGCTCATTTCATCTGTTTTGATGTTGTATGTTGTATCTTACTCTGGAAACTCTGATCGCCACTCACAGTAATACCTCTTTAATAAACGTTATAAAGAGGAATATGATGCAAAGCTATCTAATGTAATTCTGAAACTGGCTTAAAATATATTGTTTAGTATACGGAAAACAAATTAAGTTAAACTGtgttgtatatagattttttttttttactgtgtttattgatttaaaagtattttgtttggTTTTAGATGATGAAATAACAATATGCTGATGTTAGGCATGCTGTCTGAATGTCACTACAAACCCTCATTTACTATGTCGAACACTATAGATTTTATGTCGTTATTCATTACAGTACACATGTACCATAATATAATGTAAATAACAGCACAATAGCAATAAGAATGCTCTAACCCTATCATCATTTAACTTCTGTATTaattcagagttaatgtttaCATCTGAACTGTTCACTAATTTGTTTATTAGTATgttcatttattttaattttttacacAAAGTCAAAATGGAATTATTTTGTGAATTAACAATGTCTCATTTTGTATTACCCTGTAAGTCAATTAATGCTTTTTTGACTTGCCCAAATAGTTTTTGGACTGCACTATCTAAAATAAAAGTGATTTTTGCAAACTT

Function

NR:

description
adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002468618.2 True 1134 mRNA 0.33 2 20556772 20566859

Neighbor

gene id symbol gene type direction distance location
tmem14ca tm14c coding downstream 408049 20146283 ~ 20148723 (-)
sycp2l sycp2l coding downstream 469583 20063092 ~ 20087189 (-)
gnal LOC106590334 coding downstream 525679 19964439 ~ 20031093 (-)
impa2 impa2 coding downstream 605980 19945007 ~ 19950792 (-)
LOC110490939 LOC106590335 coding downstream 623607 19773451 ~ 19933165 (-)
bmp6 bmp6 coding upstream 124012 20690871 ~ 20724923 (-)
zgc:101569 LOC106590252 coding upstream 162147 20729006 ~ 20752125 (-)
pdcd6 LOC106590254 coding upstream 185648 20752507 ~ 20760847 (-)
ipo4 ipo4 coding upstream 211112 20777971 ~ 20789485 (-)
tm9sf1 tm9sf1 coding upstream 228259 20795118 ~ 20801160 (-)
G1267749 NA non-coding downstream 16679 20539825 ~ 20540093 (-)
G1267531 NA non-coding downstream 197645 20358790 ~ 20359127 (-)
G1267510 NA non-coding downstream 214704 20341797 ~ 20342068 (-)
G1267506 NA non-coding downstream 216890 20339564 ~ 20339882 (-)
G1267505 NA non-coding downstream 217615 20338892 ~ 20339157 (-)
G1268408 NA non-coding upstream 22658 20589517 ~ 20644173 (-)
G1268456 NA non-coding upstream 86784 20653643 ~ 20653858 (-)
G1268457 NA non-coding upstream 87461 20654320 ~ 20654522 (-)
G1268430 bloc1s5 non-coding upstream 90999 20657858 ~ 20660348 (-)
G1268461 NA non-coding upstream 94702 20661561 ~ 20661792 (-)
G1267452 NA other downstream 266099 20290350 ~ 20290673 (-)
G1267414 NA other downstream 288284 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 1103002 19435018 ~ 19453770 (-)
G1266471 NA other downstream 1447415 19108559 ~ 19109357 (-)
G1265456 LOC106590371 other downstream 1976609 18576539 ~ 18580163 (-)
G1268555 LOC106590243 other upstream 391513 20958372 ~ 20960089 (-)
G1269265 NA other upstream 1235828 21802687 ~ 21803352 (-)
G1271421 NA other upstream 3146496 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 5479389 26046058 ~ 26048599 (-)
G1275015 NA other upstream 5944666 26511525 ~ 26512075 (-)

Expression


Co-expression Network