LOC110489769 (pck2)


Basic Information

Item Value
gene id LOC110489769
gene name pck2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20840203 ~ 20864315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944039.1
GCGTTTTTGTTGCATGGGCAGTAAACAGTGGATATGTTCAGTAGGAGCAGGGACAGGATATGATAGTTGTATGAAGTGCTCTACTTTGTTTATTCTCTTTGCAGTGTTATAGAAAACAAACAAGTTTAACATGCGAGACACCTCCTCTCAGACCTTTTATTTGTTTTCAGACAGTCCTGTTTAATAGCCTAACCTTTGCTGAACGGACAGCGTTATCAATAGCCAAGACTACTGCTGGATTACTTGACGAAAGAAATATACATTTAGCTTGGTGTATATATGCAATCGGTTGGCTATTTGTTTGCATTGAAGTTGCGGTTTGGAGAACGAAGCGCAGAACCTGGATCAAGGCGTATGCCTCTCCGATAAGTTACACGTGTTGCAAAGTACAAGGTTCTCTCATGAGCCTACACCAGGTTACCTCAACATTAGAGTTCTTCTTCATAGGCCAATCCGATATGAGTTGTGGTTGGTCCTAAAGCGCACACGCCTCTCCTCTTTTTGTGAAGATATCTATTTCATTTTATATTTTACAAGATGTCGTGTCTTTTGCTTGGAGTTATCAGAAGACGGGGTGGCGTGGGGGCATCTGTGGGGGTCCGCTCCCTGGCCTCGATCCCCTCTCTGCCCCCAGCGGTGGCTGACTTTGTGAAGGGGGCGGTGGATGAGTGCAAGCCTGCCAATGTGCATGTGGTGACCGGGAGTGCAGAAGAGTCGGCCCACATCCTAGCTGGCCTGGAGAAGGAGGGCATGGTGAAGAAGCTACCGAAGTATGAGAACTGCTGGCTGGCACGCACAGACCCCAAGGATGTGGCTCGCGTGGAGAGTAAGACGGTGATCGTCACCAAGAACCAGAGGGACACCATCCCCACCCCCGGTGGGGGGGCTAAGAGCCAGCTGGGCAGCTGGATGAGTGAGGGTGACTTCCAGAAGGCCAGGAAGGACCGCTTCCCAGGCTGCATGGCAGGTCGAACCATGTATGTGATCCCTTTCAGTATGGGCCCGGTGGGCTCTCCGCTGTCTAAGTTTGGCGTGCAGGTGACGGACTCGCCCTACGTGGTGGCCAGCATGGGCATAATGACACGCATGGGCACCCCAGTCATGGACAAGCTGTCACAGGGGGCAGAGTTTGTGCGCTGCCAGCACTCCCTTGGGCAACCTCTCCCACTGAAAGCTCCCCTGGTCAACTCGTGGCCGTGTAGCCCAGAGAAGGTGCTGATCTCCCACCTGCCAGACACCAGGCAGATCCTGTCTTTCGGCAGCGGCTACGGAGGCAACTCTCTGCTGGGCAAGAAGTGCTTCGCTCTGCGGATCGCCTCGCGCATCGCCAAGGATGAGGGCTGGCTGGCCGAACACATGCTGATCCTGGGCATCACCAATCCTCGGGGAGTGAAGCGTTACGTGGCGGCGGCATTTCCAAGTGCTTGTGGGAAAACCAACCTGGCCATGATGAAGCCTGCGCTGCCTGGCTGGACTGTGGAGTGTGTGGGAGACGACATCGCCTGGATGAAGTTTGACAGCCAGGGTAAACTCAGGGCCATCAACCCAGAGAACGGCTTTTTCGGCGTGGCTCCTGGCACGTCCCTGAAGACCAACCCTCACGCCATGGCGACCATCGCCAAAAACACAGTGTTCACCAACGTGGGCGAGACCAGCGACGGAGGGGTATGGTGGGAGGGACTGGACCCCCCTGCTGCAGGGGTCTCCCTGACCGACTGGCATGGCAACTCCTGGAAAGCAGGAGACTCTGCCCCATGTGCCCACCCCAACTCCAGGTTCTGTACCCCGGCGGCCCAGTGTCCCATTATCGACCCGCAGTGGGAGAGTGACGAGGGAGTGCCCATCGATGCCATCATCTTCGGGGGCAGAAGGCCAGAGGGTGTCCCACTGGTGTATGAGTCGTTTAGCTGGCGTCACGGTGTGTTTGTGGGAGCCTCTATGAGGTCTGAGGCCACAGCAGCTGCTGAGTACAAAGGCAAGGTTATCATGCATGACCCCTTCGCCATGCGCCCCTTCTTCGGCTACAACTTCGGTGACTACCTGGCCCATTGGCTCAGCATGGAGACCCGCAAGGCCCCCACCCATCTGCCCAAGATCTTCCATGTCAACTGGTTCCGTAAGGACCCCACGTCGGGCTCCTTCCTCTGGCCAGGCTTCGGGGACAATGCACGCGTGCTGGAGTGGATCTTCAAGCGTTGCGGCCGCGAGAGGGAGGACGAGGCAGCAAAGAAGAGCTTGGTGGGCTGGGTGCCACAGGAGGGAGCCATCAACCTGCAGGGCCTGGGCAGCAAGGTGGACATGGGGGCCCTCTTCGACCTGCCCAAGGCCTTCTGGGAGAAGGAGACCCAGGAGCTGCGGGCGTACTTTACCCAGCAGGTGGGAGCCGACCTCCCCCAACAGGTGGAGGGAGAGCTGAAGGCTCTGGAGGACAGGGTCAGGAATGGAGAGGCATAGACCCAGATGAGTCAGAGTTGAAGAGAGAAAGTTTAGACTATTGGACATTACACTACACTGATGTTGCAATATGGTGGGGATGGgtagggtgtggggggggggtaagaaaAAGTGGCTGACAAACTGATTGCAGTTTGGGGGGAACTGCATTGAGTATATGTGGGAAGATGTAAAGCAAAGGTTCTAAATTGTAAGAGAATACAATGATATGATGCGACTGCATCACTAACGAATGCAGTTCAGTCGCCACTCACTGTCAATGGATATTTGAGTAGAATCAATGTGTAGTAATGCCTTACTGACATCTTGCAATGAAGTACAAAGGCATTGGATGTTTGTTTACAAGCTATTATCCCAAATAATAATCTCTTATCATAACAAGGTTTAACATCCATATACATTTTAacattttgcagaatattaaCGACATCTTTTGAAATGCACTGCTGGCCTCTCACTAGTCACTGAGATTACTGAATGGCCATTGGCTTGGAACATGTGAAGGAAATACATCTGATTGGCTCAGGGAACACCAAAACATTTTAACTAAATTTCATTGAGTGAAAGATTAATTCCAGTTTTTTGGCAACTCTTCAATAAAAATGCATGAAAATGATATGTTTACGTTATGTTCAATGTTGGACCAATAATACATTAAATGGacatttcatttaaatgttttattacaaTGCAATTAATAAACAACCTCAAAAACTG
>XM_036944040.1
TTAATAAAGCTCTCTTGCATACACTTACAGTACCTCATTGTTAACCTTCAGATGTATAAATAACCAGACCCGGACTCAGGCATCGCTTACCCTGGAGATCCCTTCAATCTCCACGAGTTAGGGCTCATCTGCGAAAGAGACCGTGGCCTCCACATGACCCCCTGCTGAAATTAAAGACGGGGTGGCGTGGGGGCATCTGTGGGGGTCCGCTCCCTGGCCTCGATCCCCTCTCTGCCCCCAGCGGTGGCTGACTTTGTGAAGGGGGCGGTGGATGAGTGCAAGCCTGCCAATGTGCATGTGGTGACCGGGAGTGCAGAAGAGTCGGCCCACATCCTAGCTGGCCTGGAGAAGGAGGGCATGGTGAAGAAGCTACCGAAGTATGAGAACTGCTGGCTGGCACGCACAGACCCCAAGGATGTGGCTCGCGTGGAGAGTAAGACGGTGATCGTCACCAAGAACCAGAGGGACACCATCCCCACCCCCGGTGGGGGGGCTAAGAGCCAGCTGGGCAGCTGGATGAGTGAGGGTGACTTCCAGAAGGCCAGGAAGGACCGCTTCCCAGGCTGCATGGCAGGTCGAACCATGTATGTGATCCCTTTCAGTATGGGCCCGGTGGGCTCTCCGCTGTCTAAGTTTGGCGTGCAGGTGACGGACTCGCCCTACGTGGTGGCCAGCATGGGCATAATGACACGCATGGGCACCCCAGTCATGGACAAGCTGTCACAGGGGGCAGAGTTTGTGCGCTGCCAGCACTCCCTTGGGCAACCTCTCCCACTGAAAGCTCCCCTGGTCAACTCGTGGCCGTGTAGCCCAGAGAAGGTGCTGATCTCCCACCTGCCAGACACCAGGCAGATCCTGTCTTTCGGCAGCGGCTACGGAGGCAACTCTCTGCTGGGCAAGAAGTGCTTCGCTCTGCGGATCGCCTCGCGCATCGCCAAGGATGAGGGCTGGCTGGCCGAACACATGCTGATCCTGGGCATCACCAATCCTCGGGGAGTGAAGCGTTACGTGGCGGCGGCATTTCCAAGTGCTTGTGGGAAAACCAACCTGGCCATGATGAAGCCTGCGCTGCCTGGCTGGACTGTGGAGTGTGTGGGAGACGACATCGCCTGGATGAAGTTTGACAGCCAGGGTAAACTCAGGGCCATCAACCCAGAGAACGGCTTTTTCGGCGTGGCTCCTGGCACGTCCCTGAAGACCAACCCTCACGCCATGGCGACCATCGCCAAAAACACAGTGTTCACCAACGTGGGCGAGACCAGCGACGGAGGGGTATGGTGGGAGGGACTGGACCCCCCTGCTGCAGGGGTCTCCCTGACCGACTGGCATGGCAACTCCTGGAAAGCAGGAGACTCTGCCCCATGTGCCCACCCCAACTCCAGGTTCTGTACCCCGGCGGCCCAGTGTCCCATTATCGACCCGCAGTGGGAGAGTGACGAGGGAGTGCCCATCGATGCCATCATCTTCGGGGGCAGAAGGCCAGAGGGTGTCCCACTGGTGTATGAGTCGTTTAGCTGGCGTCACGGTGTGTTTGTGGGAGCCTCTATGAGGTCTGAGGCCACAGCAGCTGCTGAGTACAAAGGCAAGGTTATCATGCATGACCCCTTCGCCATGCGCCCCTTCTTCGGCTACAACTTCGGTGACTACCTGGCCCATTGGCTCAGCATGGAGACCCGCAAGGCCCCCACCCATCTGCCCAAGATCTTCCATGTCAACTGGTTCCGTAAGGACCCCACGTCGGGCTCCTTCCTCTGGCCAGGCTTCGGGGACAATGCACGCGTGCTGGAGTGGATCTTCAAGCGTTGCGGCCGCGAGAGGGAGGACGAGGCAGCAAAGAAGAGCTTGGTGGGCTGGGTGCCACAGGAGGGAGCCATCAACCTGCAGGGCCTGGGCAGCAAGGTGGACATGGGGGCCCTCTTCGACCTGCCCAAGGCCTTCTGGGAGAAGGAGACCCAGGAGCTGCGGGCGTACTTTACCCAGCAGGTGGGAGCCGACCTCCCCCAACAGGTGGAGGGAGAGCTGAAGGCTCTGGAGGACAGGGTCAGGAATGGAGAGGCATAGACCCAGATGAGTCAGAGTTGAAGAGAGAAAGTTTAGACTATTGGACATTACACTACACTGATGTTGCAATATGGTGGGGATGGgtagggtgtggggggggggtaagaaaAAGTGGCTGACAAACTGATTGCAGTTTGGGGGGAACTGCATTGAGTATATGTGGGAAGATGTAAAGCAAAGGTTCTAAATTGTAAGAGAATACAATGATATGATGCGACTGCATCACTAACGAATGCAGTTCAGTCGCCACTCACTGTCAATGGATATTTGAGTAGAATCAATGTGTAGTAATGCCTTACTGACATCTTGCAATGAAGTACAAAGGCATTGGATGTTTGTTTACAAGCTATTATCCCAAATAATAATCTCTTATCATAACAAGGTTTAACATCCATATACATTTTAacattttgcagaatattaaCGACATCTTTTGAAATGCACTGCTGGCCTCTCACTAGTCACTGAGATTACTGAATGGCCATTGGCTTGGAACATGTGAAGGAAATACATCTGATTGGCTCAGGGAACACCAAAACATTTTAACTAAATTTCATTGAGTGAAAGATTAATTCCAGTTTTTTGGCAACTCTTCAATAAAAATGCATGAAAATGATATGTTTACGTTATGTTCAATGTTGGACCAATAATACATTAAATGGacatttcatttaaatgttttattacaaTGCAATTAATAAACAACCTCAAAAACTG
>XM_036944041.1
CCTGGGTTAATAAAGCTCTCTTGCATACACTTACAGTACCTCATTGTTAACCTTCAGATGTATAAATAACCAGACCCGGACTCAGGCATCGCTTACCCTGGAGATCCCTTCAATCTCCACGAGTTAGACGGGGTGGCGTGGGGGCATCTGTGGGGGTCCGCTCCCTGGCCTCGATCCCCTCTCTGCCCCCAGCGGTGGCTGACTTTGTGAAGGGGGCGGTGGATGAGTGCAAGCCTGCCAATGTGCATGTGGTGACCGGGAGTGCAGAAGAGTCGGCCCACATCCTAGCTGGCCTGGAGAAGGAGGGCATGGTGAAGAAGCTACCGAAGTATGAGAACTGCTGGCTGGCACGCACAGACCCCAAGGATGTGGCTCGCGTGGAGAGTAAGACGGTGATCGTCACCAAGAACCAGAGGGACACCATCCCCACCCCCGGTGGGGGGGCTAAGAGCCAGCTGGGCAGCTGGATGAGTGAGGGTGACTTCCAGAAGGCCAGGAAGGACCGCTTCCCAGGCTGCATGGCAGGTCGAACCATGTATGTGATCCCTTTCAGTATGGGCCCGGTGGGCTCTCCGCTGTCTAAGTTTGGCGTGCAGGTGACGGACTCGCCCTACGTGGTGGCCAGCATGGGCATAATGACACGCATGGGCACCCCAGTCATGGACAAGCTGTCACAGGGGGCAGAGTTTGTGCGCTGCCAGCACTCCCTTGGGCAACCTCTCCCACTGAAAGCTCCCCTGGTCAACTCGTGGCCGTGTAGCCCAGAGAAGGTGCTGATCTCCCACCTGCCAGACACCAGGCAGATCCTGTCTTTCGGCAGCGGCTACGGAGGCAACTCTCTGCTGGGCAAGAAGTGCTTCGCTCTGCGGATCGCCTCGCGCATCGCCAAGGATGAGGGCTGGCTGGCCGAACACATGCTGATCCTGGGCATCACCAATCCTCGGGGAGTGAAGCGTTACGTGGCGGCGGCATTTCCAAGTGCTTGTGGGAAAACCAACCTGGCCATGATGAAGCCTGCGCTGCCTGGCTGGACTGTGGAGTGTGTGGGAGACGACATCGCCTGGATGAAGTTTGACAGCCAGGGTAAACTCAGGGCCATCAACCCAGAGAACGGCTTTTTCGGCGTGGCTCCTGGCACGTCCCTGAAGACCAACCCTCACGCCATGGCGACCATCGCCAAAAACACAGTGTTCACCAACGTGGGCGAGACCAGCGACGGAGGGGTATGGTGGGAGGGACTGGACCCCCCTGCTGCAGGGGTCTCCCTGACCGACTGGCATGGCAACTCCTGGAAAGCAGGAGACTCTGCCCCATGTGCCCACCCCAACTCCAGGTTCTGTACCCCGGCGGCCCAGTGTCCCATTATCGACCCGCAGTGGGAGAGTGACGAGGGAGTGCCCATCGATGCCATCATCTTCGGGGGCAGAAGGCCAGAGGGTGTCCCACTGGTGTATGAGTCGTTTAGCTGGCGTCACGGTGTGTTTGTGGGAGCCTCTATGAGGTCTGAGGCCACAGCAGCTGCTGAGTACAAAGGCAAGGTTATCATGCATGACCCCTTCGCCATGCGCCCCTTCTTCGGCTACAACTTCGGTGACTACCTGGCCCATTGGCTCAGCATGGAGACCCGCAAGGCCCCCACCCATCTGCCCAAGATCTTCCATGTCAACTGGTTCCGTAAGGACCCCACGTCGGGCTCCTTCCTCTGGCCAGGCTTCGGGGACAATGCACGCGTGCTGGAGTGGATCTTCAAGCGTTGCGGCCGCGAGAGGGAGGACGAGGCAGCAAAGAAGAGCTTGGTGGGCTGGGTGCCACAGGAGGGAGCCATCAACCTGCAGGGCCTGGGCAGCAAGGTGGACATGGGGGCCCTCTTCGACCTGCCCAAGGCCTTCTGGGAGAAGGAGACCCAGGAGCTGCGGGCGTACTTTACCCAGCAGGTGGGAGCCGACCTCCCCCAACAGGTGGAGGGAGAGCTGAAGGCTCTGGAGGACAGGGTCAGGAATGGAGAGGCATAGACCCAGATGAGTCAGAGTTGAAGAGAGAAAGTTTAGACTATTGGACATTACACTACACTGATGTTGCAATATGGTGGGGATGGgtagggtgtggggggggggtaagaaaAAGTGGCTGACAAACTGATTGCAGTTTGGGGGGAACTGCATTGAGTATATGTGGGAAGATGTAAAGCAAAGGTTCTAAATTGTAAGAGAATACAATGATATGATGCGACTGCATCACTAACGAATGCAGTTCAGTCGCCACTCACTGTCAATGGATATTTGAGTAGAATCAATGTGTAGTAATGCCTTACTGACATCTTGCAATGAAGTACAAAGGCATTGGATGTTTGTTTACAAGCTATTATCCCAAATAATAATCTCTTATCATAACAAGGTTTAACATCCATATACATTTTAacattttgcagaatattaaCGACATCTTTTGAAATGCACTGCTGGCCTCTCACTAGTCACTGAGATTACTGAATGGCCATTGGCTTGGAACATGTGAAGGAAATACATCTGATTGGCTCAGGGAACACCAAAACATTTTAACTAAATTTCATTGAGTGAAAGATTAATTCCAGTTTTTTGGCAACTCTTCAATAAAAATGCATGAAAATGATATGTTTACGTTATGTTCAATGTTGGACCAATAATACATTAAATGGacatttcatttaaatgttttattacaaTGCAATTAATAAACAACCTCAAAAACTG

Function

symbol description
pck2 Predicted to enable manganese ion binding activity and phosphoenolpyruvate carboxykinase (GTP) activity. Predicted to be involved in several processes, including cellular response to hormone stimulus; gluconeogenesis; and monocarboxylic acid metabolic process. Predicted to be active in cytosol and mitochondrion. Is expressed in extension; intestinal bulb; liver; and yolk syncytial layer. Orthologous to human PCK2 (phosphoenolpyruvate carboxykinase 2, mitochondrial).

NR:

description
phosphoenolpyruvate carboxykinase [GTP], mitochondrial

GO: NA

KEGG:

id description
K01596 E4.1.1.32, pckA, PCK; phosphoenolpyruvate carboxykinase (GTP)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944039.1 False 3171 mRNA 0.52 10 20840203 20862637
XM_036944040.1 False 2778 mRNA 0.54 11 20840203 20864309
XM_036944041.1 True 2729 mRNA 0.54 10 20840203 20864315

Neighbor

gene id symbol gene type direction distance location
tm9sf1 tm9sf1 coding downstream 39043 20795118 ~ 20801160 (-)
ipo4 ipo4 coding downstream 50718 20777971 ~ 20789485 (-)
pdcd6 LOC106590254 coding downstream 79356 20752507 ~ 20760847 (-)
zgc:101569 LOC106590252 coding downstream 88078 20729006 ~ 20752125 (-)
bmp6 bmp6 coding downstream 115280 20690871 ~ 20724923 (-)
LOC110490944 NA coding upstream 15171 20879486 ~ 20880386 (-)
dcaf11 dcaf11 coding upstream 20658 20884973 ~ 20901956 (-)
thtpa NA coding upstream 39914 20904229 ~ 20906476 (-)
ngdn ngdn coding upstream 84585 20948900 ~ 20954807 (-)
LOC110489780 NA coding upstream 137803 21002118 ~ 21007272 (-)
G1268516 NA non-coding downstream 64970 20774320 ~ 20775233 (-)
G1268462 NA non-coding downstream 177922 20662074 ~ 20662281 (-)
G1268461 NA non-coding downstream 178411 20661561 ~ 20661792 (-)
G1268430 bloc1s5 non-coding downstream 179855 20657858 ~ 20660348 (-)
G1268457 NA non-coding downstream 185681 20654320 ~ 20654522 (-)
G1268568 NA non-coding upstream 10046 20874361 ~ 20874581 (-)
G1268570 NA non-coding upstream 17136 20881451 ~ 20881800 (-)
G1268604 NA non-coding upstream 97774 20962089 ~ 20962325 (-)
G1268610 NA non-coding upstream 107021 20971336 ~ 20971643 (-)
G1268618 LOC106579614 non-coding upstream 117465 20981780 ~ 20986678 (-)
G1267452 NA other downstream 549530 20290350 ~ 20290673 (-)
G1267414 NA other downstream 571715 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 1386433 19435018 ~ 19453770 (-)
G1266471 NA other downstream 1730846 19108559 ~ 19109357 (-)
G1265456 LOC106590371 other downstream 2260040 18576539 ~ 18580163 (-)
G1268555 LOC106590243 other upstream 94057 20958372 ~ 20960089 (-)
G1269265 NA other upstream 938372 21802687 ~ 21803352 (-)
G1271421 NA other upstream 2849040 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 5181933 26046058 ~ 26048599 (-)
G1275015 NA other upstream 5647210 26511525 ~ 26512075 (-)

Expression


Co-expression Network