slc22a17 (slc22a17)


Basic Information

Item Value
gene id slc22a17
gene name slc22a17
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20971804 ~ 20983450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562689.2
CACCCCCTTTGTCCCAGAGAGGATCGGTTCGACTATGGCTGTCACCCGTCCCCTTTAAGATGATGTCGGAAATAATTATGTATTATTTAATTACTTAACACTTCTTTCATGTCGGCGGACATACACTTGGGTCGCGCAACATCATTAGAAATCAGGCACCATAGAAGTCGAGCATGACAATATAGCCCAAAAATTGCTTCATTAGGTGTCTATGTTGAAACTGCGTTTTCTTCTCTGAAATTACTTTAGTTTCTAGTGCTTCTTCATACAATACTACCCTGGGACAGTAGCCTATGTTACAGGAGGATGGAATAATCGACAGCCGACAGAGAGAATACGCATAGGAAGAGTAAAGGGAATGCGGTGAAAATCCAACTCAGTTCGGAACACTGTTCCCTTTATCCCCTGCAATGTTTTGGCTTTACCAAAACGGACGTTTGAAAGTGACAGTGGGCAATCGTTAACCTACCGGATGTATTATAATATCTGACGACTATAGTAACACTGGAAAGGGATATTTCCCATATTTCCTACTCCATCTGAGGATCGACCACAACCTCTCTGACCCTCAGTCATGACATCACCTGAGTCCCccatcccctccccttccccctgtccgcctccccccctcccctcttctcccactCCCTCGTCTCccgctccctcctcctccctcccgcttcccccctccctgcctcccacgGGGGAGGTGATGGTCCTGGCCCTAGGGAGGAAGAAACAGAGGAtgctcatctgtctctccctcttgccCAATCTCTTCCtggccttccttctctcctcggATCCCCTGCTCACTCTCGCGTCGCCCCACCACTGCCGCCTCCCAGGACCTTCGCCTGCCCCGCAGGTCCTCAACGCCTCCCTGCCCTGGGAGAAAGGGGGCAGAGTGGGTGACAGCGGGGGGCTGTCTCAGTGCAAGCAGTATATCAACGGTACCCAGTCCGGGGTGGAGAACTGCGATGCTGGCTGGGACTACAATGTCACAGAAGGATTGAGAATTAACATTGTTACTGAGtggGATTTGGTGTGTGGTCAGTACTGGCTGGTCCCAGTCGAGGAGGTGTCCTTTATCCTGGGTGTTCTGACAGGATGCCTGGGACTGGGCTTTGCTGCTGACAGACTGGGCAGGTTGAAGACACTGCTCTCCTCGCTAACCCTCTCGGTGGTATTTGGCGTGCTCGTGTGCGTCTCTACCTCCCCCCCTATCTTTATTGTCATGCGCTTTTGCCTGGCTGCTGCTAGTGCTGGTGTCTACCTCACGCTTTACATCACACGTCTTGAACTCTGTGATCCCTCACTACGTCTGCTGGTCACCATGGTGGCAGGACTAACTACGGTTTCTGGGGAGCTGCTGTTGCTGGGTGTTGCTCTGTCTTGCCAGTCCTGGAGGGGTTTACTCGGAGCGGGGGCTGCAccactctctctgttcctcacctacggTATTCCAGGAGTATTTCCTGAGTCTCCTCGCTGGCTTCTTCTCTCTGAGAGATCAGCTGATCTGAATTccttcagtgaaagaagagatagagagagggatgacgaGAGCTTCACAGAGTTGGACTCGGAGCCGTCTACCTCTACTTACCCCCACCTGTCCTTCCCAGAGCTTGTACACAGCCGGAACATCTGGAAAAACATGTGTGTGCTCGGCTTCACCTCGTTCATTTCCCATGGCATTAGTCATTGTTACAGCTCATTTCGGGGTGATGTCAGAGGCACTGCCCCCAGCTTCTATTGGACCTATCTGCTGTCCGTCTGTGCGGGAGGAGGGGCCTGGCTGTTGTTATGGGCAACCGTGAACAGGTGCGGTCGCCGTGGTATCCTGCTCCTCGCCATGACAATGACAGGGCTGGCATCTCTGATTCTCCTCGGACTGGTGGAGTATCTAAGTGAGACGGCCATCACTGTATTCTCAGTGATGGGACTTTTCTCCTCCCAGGCGgctgcctctctctgtgtcctcttcACTGCAGAGATCATGCCCACCATCATCAGGGGCAGTGGCGTGGGCACGGTGTTGGCCCTGGGCTGCGTGGGCCGCCTCACCTCGCCCCTCATGGACCTACGCAACCACTATGGCTACTTCCTGCACCACGTGGTGTACTCCACCCTGGCCCTGCTGGCCGTGCTCTCCATCCTGCTGCTGCCTGAGAGCAAGAGGAAACCACTGCCCCAGACACTGGCCGATGGGGAGCAGTACCGACGCCCCCCGCTGGGCCGGAGGAGGAGGGACAACGTTCCCCTGCTGGCCACCCCCAACCCAGAGACCTAGCCGCCCAAACATCACACTTCAGTCATAACGCCAGCCCAGAGTGTCACCAGGTCCATGCTGCAGAAAGGAAGATGGGTAAAAATGAAGAGGGAGAAGTGTTGTCTGGTTAAGATGGTTGTGTAGAGCCAGTGAAGGGACATGGTAGAATCAACCACACAATCTACTCTTCCTAACATATCATTTTCTAGTCATTCCTAACACAGGAGTGTGGGTGGGGCGGCCATGCGTCGTTCGTCTGTCTCCATTTCTGCCAatgaagtgagtgtgtgtgtatgtacgtgaaTGTGTGTATGCGCACGCGTATGTGTGGCCCCGGTCGGATGGCGGTGTGGAGAGTGCTCGTCATGCAGTGACCTGTCCCCCCTACCTTTCCTATAAGGCCTGTGTGTCACGGAACGGCATCAGCTGCTTCGTGCTCATGCTCCAGAACGCCCACCTTTGATGTGTATGATCTGACAGAGCATGGCATCACACACAGCTCACAGAGgcagatctactgtcctgtaaaTACCATAAACCTAGTTTCTTTAACTTAATGAATGCTGGCTTATCTGTTGATAAAAAACAGTAGGAGTTTTGTTACATAGTGCTGGATCTTGGAAGAATGCTTTTGTACTGTGCTTGGCACTTAGCCAAGTTGATAGAGCACATCTGTCTACTGCTCTTAAAGGCAATGGGGAAAATAACATGGATTGATTGAAGATGAATTGAGTTACGTTATAATTGAGGGTTGTTTGAGGAAGCTTTGTGAACTTGCATCAAATAAATAGTAATAGGCGCCCTCCTACAATCAGTTGATAAAAAAGAGAGAAAATTACTGTAGTACCTCAAACTTGATTGGATGTGATAAAATTATATGAATTACATTTTCAGATGTGGCCTGGAGCCAATACTGTTTATGGGTCATTAATCTTGATGGTCTTGTCTAGGCTCTCAGACCCACCTTACTGTAGGCTCCTctgaagacaggaagagatgaTAGAAAGAGTGTCTGTGCATTCAAATCTGAAAACCTTGTGTAAATAGACATGTATGGTAGAGAATGGATGGACACACCTTTACACTCCCCTATGTGTTTATttagacagtgaagctaaaacttttaatttggctctatactccagcattttgagatcaaatgtttcatatgaggcgacAGTAGATAATGTCAACTTTTATTTAAGGTTATTTTCATACATGtctgttttaccgtttagaaatgcaaactagtcccccccccccatatgaaggtgtcataagtatttggacaaattaacttatagtgtattacatttcgtcaaaagtgtagtatttgaCCCCATATTTGTAGCACGCAATGAATACACCGAGCTGGTAACtatacaaacttgttggatgcatttgcagtttgttttggttgtgttttcagATTATGTTGTA
>TU1448608
TCGGCGGACATACACTTGGGTCGCGCAACATCATTAGAAATCAGGCACCATAGAAGTCGAGCATGACAATATAGCCCAAAAATTGCTTCATTAGGTGTCTATGTTGAAACTGCGTTTTCTTCTCTGAAATTACTTTAGTTTCTAGTGCTTCTTCATACAATACTACCCTGGGACAGTAGCCTATGTTACAGGAGGATGGAATAATCGACAGCCGACAGAGAGAATACGCATAGGAAGAGTAAAGGGAATGCGGTGAAAATCCAACTCAGTTCGGAACACTGTTCCCTTTATCCCCTGCAATGTTTTGGCTTTACCAAAACGGACGTTTGAAAGTGACAGTGGGCAATCGTTAACCTACCGGATGTATTATAATATCTGACGACTATAGTAACACTGGAAAGGGATATTTCCCATATTTCCTACTCCATCTGAGGATCGACCACAACCTCTCTGACCCTCAGTCATGACATCACCTGAGTCCCccatcccctccccttccccctgtccgcctcc

Function

symbol description
slc22a17 Orthologous to human SLC22A17 (solute carrier family 22 member 17).

NR:

description
PREDICTED: solute carrier family 22 member 17

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562689.2 False 3715 mRNA 0.50 10 20971804 20983450
TU1448608 True 513 lncRNA 0.45 2 20971915 20973334

Neighbor

gene id symbol gene type direction distance location
cebp1 LOC106590243 coding upstream 11721 20958415 ~ 20960083 (+)
pabpn1 LOC106579615 coding upstream 28115 20927320 ~ 20943689 (+)
zfhx2 zfhx2 coding upstream 51541 20906870 ~ 20920263 (+)
LOC110489770 psme1 coding upstream 92571 20874867 ~ 20879233 (+)
LOC110490943 LOC106590259 coding upstream 156294 20812409 ~ 20815510 (+)
LOC100136149 LOC100136486 coding downstream 47207 21030657 ~ 21046564 (+)
LOC110489782 LOC106590268 coding downstream 72208 21055658 ~ 21074100 (+)
LOC110490945 LOC106589989 coding downstream 100940 21084390 ~ 21092435 (+)
LOC110489785 LOC106590267 coding downstream 124324 21107774 ~ 21130305 (+)
LOC110489784 LOC106590267 coding downstream 162067 21145517 ~ 21161815 (+)
G1267986 NA non-coding upstream 1869 20969282 ~ 20969935 (+)
G1267965 NA non-coding upstream 67285 20904265 ~ 20904519 (+)
G1267962 NA non-coding upstream 69097 20902493 ~ 20902707 (+)
LOC110490942 NA non-coding upstream 167042 20801241 ~ 20804982 (+)
G1267867 NA non-coding upstream 193306 20777986 ~ 20778498 (+)
G1268075 NA non-coding downstream 188512 21171962 ~ 21172222 (+)
G1268081 NA non-coding downstream 271811 21255261 ~ 21257850 (+)
G1268151 NA non-coding downstream 304181 21287631 ~ 21289238 (+)
G1268178 NA non-coding downstream 347626 21331076 ~ 21331425 (+)
G1268212 NA non-coding downstream 391436 21374886 ~ 21376176 (+)
G1267949 pck2 other upstream 130406 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 1291699 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 2109293 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 5077640 15885437 ~ 15895996 (+)
G1261980 NA other upstream 5235387 15735930 ~ 15736417 (+)
slc12a7b LOC106590280 other downstream 802771 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2149409 23132828 ~ 23146739 (+)
G1270643 NA other downstream 2393858 23377308 ~ 23377560 (+)
G1270652 NA other downstream 2423210 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 2462388 23445838 ~ 23451494 (+)

Expression


Co-expression Network