LOC110489782 (LOC106590268)


Basic Information

Item Value
gene id LOC110489782
gene name LOC106590268
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21055658 ~ 21074100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562691.2
AAGAGTGTCGGAgaccagggggagacagaccagggggaGACACAAGGCACCGGACATCCTAAAGTAGAGATCTTTTCCACCAAACGTATCCAAGGGGTGACCAACAACAGGTTTAAGAATGGGGGACAGTTTGATGGCAGAGTTTGGCGCCGCAGCTTCCTTTCTGCGTAAATCTGACAAGGAGCGTATGGAATGCCAGACTAGACCCTTTGACATAAAGAGAGAGTGCTATGTGCCTGACCCTGAGGTAGAATACGTCAAGGCCACAATCACCAGCAGAGATGGGGCTAAAGTCACCGCTGAAACAGAGTTTGGAAAGactgttactgtgaaGGAGGACGACGTCCACCCCCAGAACCCGCCAAAGTTTGATAAAATTGAGGACATGGCGATGTTCACCTTCCTGCACGAGCCCGCTGTGCTGTTTAACCTCAAAGAGCGTTACGCAGCCTGGATGATCTACACCTACTCAGGGCTGTTCTGTGTCACTGTCAACCCATACAAGTGGCTGCCAGTGTACGATCAGTCTGTTGTCAATGCATACAGAGGCAAGAAGAGGACAGAAGCTCCTCCTCACATCTTCTCCATCTCTGACAATGCATACCAGTACATGTTGTCAGACAGGGAAAATCAGTCTGTCCTTATCACTGGAGAATCCGGTGCTGGAAAGACTGTTAACACCAAGAGAGTCATCCAGTACTTCGCCAGCATTGCTGCTGTTAGCGGAAAGAAAAGTGCAGCGGAAgaaaaaaagGGGACCCTGGAGGATCAAATCATCCAGGCCAATCCTGCCCTGGAGGCTTTTGGTAATGCCAAGACCATCAGGAATGACAACTCCTCCCGATTCGGTAAATTCATCCGCATTCATTTTGGAGTCAGTGGGAAGCTTTCGTCTGCTGACATTGAGACTTATCTTCTGGAGAAGTCACGTGTCACTTTCCAGCTCAAGGCTGAGAGAGACTATCACATCTTCTACCAGATCCTGTCCCAAAAGAAACCAGAACTGCTGGAGATGCTACTCATCACCAGCAATCCCTATGACTATGCCTTCATCTCCCAAGGAGAGATTGCTGTAACCTCCATTAATGATGCAGATGAGCTAATGGCTACTGATGATGCCTTTGATGTGCTGGGCTTCTCCCAAGAGGAGAAGAATGGCATTTATAAGCTGACTGGTGCTATCATGCACTACGGCAACATGAAGTTCAAGAATAAACAGCGGGAGGAGCAAGCAGAGGCAGATGGCACTGAGGATATTGACAAAGCTGCATATCTGATGGGCCTGAACTCTGCTGACCTGGTCAAGGGGCTGTGTCATCCAAGGGTCAAAGTAGGAAATGAGTGGGTCACCAAAGGTCAGAATGTCGACCAGGTGTACTACTCTATTGGTGCACTGTCAAAGAAAGTTTACGAGAACATGTTCCTCTGGATGGTGATAAGAATCAACCTTACTCTGGACACTAAGAACGCTCGTCAGCACTACATTGGTGTGCTGGACATTGCTGGCTTTGAGATCTTTGATTTCAACACCTTTGAGCAGCTGTGCATCAACTTCACTAATGAGAAGCTGCAGCAGTtcttcaaccaccacatgtttgTGCTGGAGCAGGAAGAGTATAAGAAAGAGGGCATCGTCTGGGAGTTCATTGATTTTGGCATGGACTTGGCTGCCTGCATTGATCTCATTGAAAGGCCCATGGGTATCATGTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCCAGTGATTCCACATTCAAAGCGAAGCTGTATGACACCCATCTGGGCAAAAATGCCTGCTTCCAGAAGCCTAGAATTGTTAAGGGTAGACCAGAGGCCCATTTCTCCCTGGTTCACTATGCTGGCATTGTTGACTACAACATTGGTAACTGGCTGGTGAAGAACAAGGACCCCCTGAATGAGACTGTGGTCGGACTGTTCCAGAAGTCAAGTCTTAAGTTCCTGGCCAACCTCTTTGTGAACTATGCTGGTGCAGAAGGAGCACCTGAAGAAAAAGCGGCTGGAGGAAAAAAGAAGAAAGGCTCTTCCTTCCAGACTGTGTCTGCATTGCACAGGGAGAACTTGGGTAAACTCATGACCAACTTGAGGTCTACTCACCCCCACTTTGTGCGTTGCATCATCCCCAACGAGACCAAGACTCCTGGGGCCATGGAGAATCCTCTGGTCATGCACCAGCTGCGCTGTAACGGTGTGCTGGAAGGCATCAGGATCTGCAGAAAGGGCTTCCCCAACAGAATCCTGTATGCCGACTTCAAACAAAGATACCGCATCCTCAATCCAAATGCTATCCCTGAGGGTCAGTTCATGGACAACATGAAGGCAGCTGAAAAACTGTTGGGCTCTTTGGATATTGACCATACCCAGTACAGATTAGGACACACTAAGGTGTTCTTCAAGGCTGGTCTCCTGGGTACTCTTGAGGAGATGAGAGACGATCGTCTCGCTCTTATCATCACTGGCTTCCAGGCCAGATCACGTGGTCTACTTGCCAGAATTGAGTTCCAGAAAATTGTTGACCGCAGGGATGCCTTGCTTGTGATCCAATGGAACATTCGTGCCTTCATGGGTGTCAAGAATTGGCCCTGGATGAAGATGTACTTCAAGATCAAACCTCTGCTGAAGTCAgcagagactgagaaggagatgGCCAACATGAAGGAAGAATTCCTGAAGCTTAAAGAGGCTTATGCTAAAAGTGAAGCCCGTAAAAAGGAGCTGGAAGAGAAGATGGTGTCCCTTATCCAAGAGAAGAACGACCTGCAGCTCGCTGTCCAAACTCAAGAAGACACTATTGGTGATGCTGAAGAGAGATGTGAAGGTCTGATCAAGAGCAAAATCCAGCTTGAGGCCAAAGCCAAAGAGCTGACAGAAAgactggaggatgaggaggagatgaaTTCAGAGCTAACTGCTAAGAAGAGGAAGCTGGAGGATGAGTGCTCAGAACTCAAGAAGGACATTGATGATCTGGAGCTCACTCTGGCTAAAGTGGAGAAGGAAAAGCATGCCACAGAGAACAAGGTTAAAAACCTTACTGAGGAGATGGCAGCTCTGGATGAAATCATTGCCAAGCTGACCAAGGAGAAGAAGGCTCTGCAAGAGGCTCATCAACAAACGCTGGATGACCTGCAGAGTGAGGAGGACAAAGTCAACACGCTGACCAAGGCCAAAGCCAAACTGGAACAGCAAGTTGATGATCTTGAAGGGTCTCTGGAGCAAGAGAAGAAGGTGAGAATGGACCTTGAGAGAGCCAAGAGAAAGCTGGAGGGAGATTTAAAGTTGACCCAGGAGAGCCTAATGGACCTGGAGAATGACAAGCAGCAGCTGGAGGAGAGAATGAAGAAGAAGGACTTTGAGATGAGCCAACTCAACAGCAAGATTGAGGATGAGCAGGCTTTGGGTGCCCAGCTTCAGAAGAAACTGAAGGAGCTGCAGGCCCGCATTGAGGAATTAGAGGAAGAGCTGGAGGCTGAAAGAGCTGCCCGTGCCAAGGTGGAGAAACAGAGGGCAGACTTGGCCAGAGAGCTAGAAGAGATCAGTGAGAGGCTGGAGGAGGCTGGTGGAGCCACTGCTGCCCAGATTGAGATGAACAAGAAGAGGGAGGCTGAGTTCCAGAAGGTGCGCAGAGACCTTGAAGAGGCTACCCTGCAGCATGAGGCTACAGCTGCCACTCTGAGGAAGAAAAATGCTGACAGTGTAGCTGACCTGGGAGAACAGATTGACAACCTTCAGAGAGTGAAGCAGAAGCTGGAGAAAGAGAAGAGTGAGCTCAGGCTGGAGCTGGATGATGTGGTCTCCAACATGGAGCAGATTGTCAAGGCTAAGACAAACTTGGAGAAAATGTGCCGCACTCTAGAGGACCAGATGAGTGAATACAGGACGAAAGCTGAGGAAGGACAGCGATCCATCAATGATTTCACAATGCAGAAAGCAAAGCTTCAAACTGAGAATGGTGAACTTGCCAGACAGTTGGAGGAGAAAGACTCTCTGGTCTCTCAACTGACCAGAGGTAAGCAGTCCAACGTTCAGCAGATTGAAGACCTCAAGAGACAATTGGAGGAGGAAGTCAAGGCAAAGAACGCACTTGCCCATGCAGTGCAGTCTGCTCGCCATGACTCAGATCTGTTGAGGGAGCAGTATGAGGAGGAACAGGAGGCCAAGGCTGAGCTGCAGCGTGGCATGTCCAAGGCTAATGCTGAGGTGGCTCAGTGGAGAACCAAGTATGAAACTGATGCCATCCAGAAGACTGAAGAGCTTGAGGACGCAAAGAAGAAACTGGCTCAGCGTTTGCAGGATGCAGAGGAAGCTGTGGAAGCCGTAAATGCTAAATGTTCATCCCTAGAGAAGACTAAACACAGACTCCAGAATGAGATTGAAGATCTCATGGTGGATGTGGAGAGATCCAATGCAGCTGCTGCCTCTTTGGACAAGAAGCAAAGGAACTTTGACAAGGTCCTGGCTGAGTGGAAGCAGAAGTTTGAGGAGTCTCAGACTGAGCTGGAGAGCTCCCAGAAAGAGGCCAGATCTCTCAGCACTGAGCTCTTCAAACTCAAGAACTCTTATGAGGAGTCTCTGGATCATCTGGAGACCATGAAGAGGGAGAACAAGAACCTCCAAGAGGAAATTTCTGACCTGACGGAGCAGCTTGGTGAGGGAGGAAAGAGCATCCATGAGCTGGAAAAGATCCGTAAACAGCTGGAGCAGGAGAAGGCTGAGATACAGTCTGCTCTAGAGGAAGCTGAGGGCTCCCTAGAGCATGAGGAGGGCAAGATCCTGAGAGCTCAGCTGGAGTTCAATCAGGTAAAAGCTGACATTGAACGGAAGCTGGTGGAGAAGGATGAGGAAATGGAGATGAATAAGAGGAACCAGCAGAGAGTTGTGGATACCCTGCAAAGCTCACTGGAGTCAGAGACTCGCAGCAGGAATGAAGCTCTCAGgctgaagaagaagatggagggagatctCAATGAGATGGAGATCCAGCTCAGCCAGGCCAACAGGCAGGCATCAGAGGCCCAGAAGCAACTTAAGGGTCTCCATTCCCATCTGAAGGATTCTCAAATGCAGCTGGATGATGCTCTTCGTGTCAGTGATGACCTGAAGGAGAACATTGCCATTGTGGAGAGACGTAACAACCTGATGCAGGCTGAACTGGATGAGCTGAGAGCCCtggtggagcagactgagagagGCCGCAAACTGGCTGAGCAGGAACTGCTGGATGTTAGTGAGAGAGTTCAGCTGCTGCACTCACAGaaCACCAGCTTACTGAGCCAGAAGAAGAAGCTAGAGGGCGACACATCCCAGCTTCAGAATGAAATGGAGGAGGCTGTGCAGGAGTGTAGAAATGCTGAGGAAAAAGCCAAGAAGGCCATTACTGATGCTGCCATGATGGCAGAAgagctgaagaaggagcaggACACCAGTGCTCACCTGGAGCGTATGAAAAAGAACATGGAGCAGACCATCAAGGACCTGCAGCACCGCCTGGATGAAGCTGAACAAATTGCCATGAAGGGTGGCAAGAAGCAGATCCAGAAGCTGGAGGCCAGAGTGAGAGAGCTAGAGACTGAAGTGGAACTGGAGCAAAGGAGGAGCAGTGATTCTGTAAAAGGAGTCCGTAAATATGAGAGACGCATCAAAGAACTCACCTACCAGACTGAGGAAGACCGTAAGAATTTGAGCCGTCTGCAGGACCTGGTGGACAAACTGCAGCTTAAGGTCAAATCCTACAAGAGAACTTCAGAGGAGGCTGAGGAACAAGCCAATGCCAATTTGGGCAAGTTCCGTAAGATTCAGCATGAACTGGATGAGGCAGAAGAGAGGGCTGATATTGCTGAGTCTCAGGTCAACAAGATGAGAGCCAAGAGTCGTGATGCCGGATCCAAGAAAGGAAAGGATGAAGAGTGAGGCCAAGAGTTGTGATGCCGACTCCCAGAAAGGACATGATGAAGAGTGAAGCTCTCGGATGGACCTTTCTGAAAATCTCCTGACTGTAGTGCTTTAGTTGTTTCTCTATTCTCCATGTAACATGAGCAGAATAAAGAATAAAGTCAAGTTAAATAGCC

Function

NR:

description
myosin-7-like

GO:

id name namespace
GO:0031444 slow-twitch skeletal muscle fiber contraction biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562691.2 True 6090 mRNA 0.49 40 21055658 21074100

Neighbor

gene id symbol gene type direction distance location
LOC100136149 LOC100136486 coding upstream 9094 21030657 ~ 21046564 (+)
slc22a17 slc22a17 coding upstream 72208 20971804 ~ 20983450 (+)
cebp1 LOC106590243 coding upstream 95575 20958415 ~ 20960083 (+)
pabpn1 LOC106579615 coding upstream 111969 20927320 ~ 20943689 (+)
zfhx2 zfhx2 coding upstream 135395 20906870 ~ 20920263 (+)
LOC110490945 LOC106589989 coding downstream 10290 21084390 ~ 21092435 (+)
LOC110489785 LOC106590267 coding downstream 33674 21107774 ~ 21130305 (+)
LOC110489784 LOC106590267 coding downstream 71417 21145517 ~ 21161815 (+)
LOC110489799 NA coding downstream 574037 21648137 ~ 21649966 (+)
aoc1 LOC106590278 coding downstream 633636 21707736 ~ 21713134 (+)
G1267986 NA non-coding upstream 85723 20969282 ~ 20969935 (+)
G1267965 NA non-coding upstream 151139 20904265 ~ 20904519 (+)
G1267962 NA non-coding upstream 152951 20902493 ~ 20902707 (+)
LOC110490942 NA non-coding upstream 250896 20801241 ~ 20804982 (+)
G1268075 NA non-coding downstream 97862 21171962 ~ 21172222 (+)
G1268081 NA non-coding downstream 181161 21255261 ~ 21257850 (+)
G1268151 NA non-coding downstream 213531 21287631 ~ 21289238 (+)
G1268178 NA non-coding downstream 256976 21331076 ~ 21331425 (+)
G1268212 NA non-coding downstream 300786 21374886 ~ 21376176 (+)
G1267949 pck2 other upstream 214260 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 1375553 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 2193147 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 5161494 15885437 ~ 15895996 (+)
G1261980 NA other upstream 5319241 15735930 ~ 15736417 (+)
slc12a7b LOC106590280 other downstream 712121 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2058759 23132828 ~ 23146739 (+)
G1270643 NA other downstream 2303208 23377308 ~ 23377560 (+)
G1270652 NA other downstream 2332560 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 2371738 23445838 ~ 23451494 (+)

Expression


Co-expression Network