LOC110489785 (LOC106590267)


Basic Information

Item Value
gene id LOC110489785
gene name LOC106590267
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21107774 ~ 21130305 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562693.2
ATGGGGGACAGTTTGATGGCAGAGTTTGGCGTCGCAGCGCCCTATCTGCGTAAATCTGACAAGGAGCGTATGGAATGCCAGACAAGACCCTTTGACATAAAGAGAGAGTGCTATGTGCCTGACCCTGAGGTAGAATACGTCAAGGCCATAATCACCAGCAGAGATGGGGCTAAAGTCACCGCTGATACTGAGTTTGGAAAGactgttactgtgaaGGAGGATGATGTCCATCCCCAGAACCCGCCAAAGTTTGATAAAATTGAGGACATGGCGATGTTCACCTTCCTGCACGAGCCCGCTGTGCTGTTTAACCTCAAAGAGCGGTACGCAGCCTGGATGATCTACACCTACTCAGGGCTGTTCTGTGTCACTGTCAACCCATACAAGTGGCTGCCAGTGTACGATCAGTCTGTTGTCAATGCATACAGAGGCAAGAAGAGGAGTGAAGCTCCACCTCACATCTTCTCCATTTCTGACAATGCCTACCAGTACATGTTGTCAGACAGGGAAAATCAGTCTGTCCTTATCACTGGAGAATCCGGTGCTGGAAAGACTGTTAACACCAAGAGAGTCATCCAGTACTTCGCCAGCATTGCTGCTGTTAGTGGAAAGAAAAGTGTATCAGAAGAAAAAAAGGGGACCCTGGAGGATCAAATCATCCAGGCCAATCCTGCCCTGGAGGCTTTTGGTAATGCCAAGACCATCAGGAATGACAACTCCTCCCGATTCGGTAAATTCATCCGcattcattttggagtcactgGGAAGCTTTCGTCTGCTGACATTGAGACTTATCTTCTGGAGAAGTCACGTGTCACTTTCCAGCTCAAGGCTGAGAGAGACTATCACATCTTCTATCAGATCCTGTCCCAACAGAAACCAGAACTTCTGGAGATGCTACTCATCACCAGCAATCCCTATGACTATGCCTTCATCTCCCAAGGAGAGATTGCTGTAACCTCCATTAATGATTCAGATGAGCTAATGGCTACTGATGATGCCTTTGATGTGCTGGGCTTCTCCCAAGAGGAGAAGAATGGCATGTATAAGCTGGTTGGTGCAATCATGCACTACGGCAACATGAAGTTCAAGAATAAACAGCGGGAGGAGCAAGCAGAGGCAGATGGCACTGAGGATCTTGACAAAGCTGCATATCTGATGTGTCTGAACTCTGCTGACCTGGTCAAGGGGCTGTGTAACCCAAGGGTCAAAGTAGGAAATGAGTGGGTCACCAAAGGTCAGAATGTCAACCAGGTGTACTACTCTGTTGGTGCACTGGCAAAGAAAATTTACGAGAACATGTTCCTTTGGATGGTGATAAGAATCAACCTTACTCTGGACACTAAGAACGCTCGTCAGCACTACATTGGTGTACTGGACATTGCTGGCTTTGAGATCTTTGAGTTCAACACCTTTGAGCAGCTGTGCATCAACTTCACTAATGAGAAGCTGCAGCAGTtcttcaaccaccacatgtttgTGCTGGAGCAGGAAGAGTATAAGAAAGAGGGCATCGTCTGGGAGTTCATTGACTTTGGCATGGACTTGGCTGCCTGCATTGACCTCATTGAAAGGCCCATGGGTATCATGTCCATCCTTGAAGAGGAGTGCATGTTCCCTAAAGCCAGTGATAATACATTCAAAGCTAAGCTGTATGATACGCATCTCGGCAAAAATGCCTGCTTCCAGAAGCCTAGGATTGTTAAGGGTAAACCAGAGGCCCATTTCTCCATGGTTCACTATGCTGGCATTGTTGACTACAACATTGGTAACTGGCTGGTGAAGAACAAGGACCCCCTGAATGAGACTGTGGTTGGACTGTTCCAGAAGTCAAGTCTTAAGTTCCTGGCCAACCTGTTTGCAAACTATGCTGGTGCAGAAGGAGCACCTGAAGAAAAAGTGGCTGGAGGAAAAAAGAAGAAAGGCTCTTCCTTCCAGACTGTGTCTGCATTGCACAGGGAGAACTTGGGTAAACTCATGACCAACTTGAGGTCTACTCACCCCCACTTTGTGCGTTGCATCATCCCCAATGAGACCAAGACTCCTGGGGCCATGGAGAATCCTCTGGTCATGCACCAGCTGCGCTGTAACGGTGTGCTGGAAGGCATCAGGATCTGCAGAAAGGGCTTCCCCAACAGAATCCTGTATGCTGACTTCAAACAAAGATACCGCATCCTCAATCCAAATGCTATCCCTGAGGGTCAGTTCATGGACAACATGAAGGCATCAGAAAAACTGTTGGGCTCTTTGGATATTGACCACACCCAGTACAGATTAGGACACACCAAGGTGTTCTTCAAGGCTGGTCTCCTGGGTCTActtgaggagatgagagatgATCGTCTCGCTCTTATCATCACTGCATTCCAGGCCAGATCACGTGGTCTACTTGCTAGAATTGAGTTCCAGAAAATGGTTGACCGCAGGGATGCCTTGCTTGTGATCCAATGGAACATTCGTGCCTTCATGGGTGTCAAGAATTGGCCCTGGATGAAGCTGTACTTCAAGATCAAACCTCTACTGAAGTCAgcagagactgagaaggagatgGCCAACATGAAGGAAGAATTCCTGAAGCTTAAAGAGGCTTATGCTAAATCTGAAGCTCGTAGAAAGGAGCTGGAAGAGAAGATGGTCTCCCTTCTCCAAGAGAAGAATGACCTGCAGCTCGCTGTCCAAACTCAAGAAGACACTATTGTTGATGCTGAAGAGAGATGTGAGGGTCTGATCAAAAGCAAAATCCAGCTTGAGGCCAAAGCAAAAGAGCTGACAGAACgactggaggatgaggaggagatgaaTTCAGAGCTAACTGCTAAGAAGAGGAAGCTGGAGGATGAGTGCTCAGAACTCAAGAAGGACATTGATGATCTGGAGCTCACTCTGGCTAAAGTGGAGAAGGAAAAGCATGCCACAGAGAACAAGGTTAAAAACCTTACTGAGGAGATGGCAGCTCTGGACGAAATCATTGCCAAGCTGACCAAGGAGAAGAAGGCTCTGCAAGAGGCTCATCAACAAACGCTGGATGACCTGCAGAGTGAGGAGGACAAAGTCAACACGCTGACCAAGGCCAAAGCCAAACTGGAACAGCAAGTTGATGATCTTGAAGGGTCTCTGGAGCAAGAGAAGAAGGTGAGAATGGACCTTGAGAGAGCCAAGAGAAAGCTGGAGGGAGATTTAAAGTTGACCCAGGAGAGCCTAATGGACCTGGAGAATGACAAGCAGCAGCTGGAGGAGAGAATGAAGAAGAAGGACTTTGAGATGAGCCAACTCAACAGCAAGATTGAGGATGAGCAGGCTTTGGGTGCCCAGCTTCAGAAGAAACTGAAGGAGCTGCAGGCCCGCATTGAGGAATTAGAGGAAGAGCTGGAGGCTGAAAGAGCTGCCCGTGCCAAGGTGGAGAAACAGAGGGCAGACTTGTCCAGAGAGCTAGAAGAAATCAGTGAGAGGCTGGAGGAGGCTGGTGGAGCCACTGCTGCCCAGATTGAGATGAACAAGAAGAGGGAGGCTGAGTTCCAGAAGGTGCGCAGAGACCTTGAAGAGGCTACCCTGCAGCATGAGGCTACAGCTGCCACTCTGAGGAAGAAAAATGCTGACAGTGTAGCTGACCTGGGAGAACAGATTGACAACCTTCAGAGAGTGAAGCAGAAGCTGGAGAAAGAGAAGAGTGAGCTCAGGCTGGAGCTGGATGATGTGGTCTCCAACATGGAGCAGATGGTTAAGTCCAAAACAAACTTCGAGAAAATGTGCCGCACTCTGGAGGACCAGATGAGTGAATACAGGACAAAAGCTGAGGAAGGACAGCGATCCATCAATGATTTTACCATGCAGAAAGCAAAGCTTCAAACTGAGAATGGTGAACTTGCTAGACAGTTGGAGGAGAAGGACTCTCTGGTCTCTCAACTGACCAGAGGTAAGCAGTCCAACGTTCAGCAGATTGAAGACCTAAAGAGACAATTGGAGGAGGAAGTCAAGGCCAAGAACGCACTTGCCCATGCAGTGCAGTCTGCTCGCCATGACTCAGATCTGTTGAGGGAGCAAtatgaggaggagcaggaggccaAGTCTGAGCTGCAGCGTGGTATGTCCAAGGCTAATGCTGAGGTGGCTCAGTGGAGAACCAAGTATGAAACTGATGCCATCCAGAAGACTGAGGAGCTTGAGGACGCAAAGAAGAAGCTGGCTCAGCGTCTGCAGGATGCAGAGGAAGCTGTGGAAGCTGTAAATGCTAAATGTTCATCCCTAGAGAAGACTAAACACAGACTCCAGAATGAGATTGAAGATCTCATGGTGGATGTGGAGAGATCTAATGCAGCTGCTGCCTCTCTGGACAAGAAGCAAAGGAACTTTGACAAGGTCCTAGCTGAGTGGAAGCAGAAGTTTGAGGAGTCTCAGACTGAGCTGGAGAGCTCCCAGAAAGAGGCCAGATCTCTCAGCACTGAGCTCTTCAAACTCAAGAACTCTTATGAGGAGTCTCTGGATCATCTTGAGACCATGAAGAGGGAGAACAAGAACCTCCAAGAGGAAATTTCTGACCTGACTGAGCAGCTTGGTGAAGGAGGAAAGAGCATCCATGAACTGGAGAAGATCCGTAAACAGCTGGAACAGGAGAAGTCTGAGATACAGTCTGCTCTAGAGGAAGCTGAGGCCTCCCTAGAGCATGAGGAAGGGAAGATCCTGAGAGCTCAGCTGGAGTTCAATCAGGTGAAAGCTGACATTGAACGGAAGCTGGTGGAGAAGGATGAGGAAATGGAGATGAATAAGAGGAACCAGCAGAGAGTTGTGGATACCCTGCAAAGCTCCCTGGAGTCAGAGACTCGCAGCAGGAATGAAGCTCTCAGgctgaagaagaagatggagggagatctCAATGAGATGGAGATCCAGCTCAGCCAGGCCAACAGGCAGGCATCCGAGGCCCAGAAGCAACTTAAGGGTCTCCATTCCCATTTGAAGGATTCTCAACTGCAGCTGGATGATGCTCTTCGTAGCAATGATGACCTGAAGGAGAACATTGCCATTGTGGAGAGACGGAACAACCTGATGCAGGCTGAACTGGATGAGCTAAGAGCCCtggtggagcagactgagagagGCCGCAAACTGGCTGAGCAGGAACTGCTGGATGTTAGTGAGAGAGTTCAGCTGCTCCACTCACAGAACACCAGCCTACTGAGCCAGAAGAAGAAGTTAGAGGGCGACACATCCCAGCTTCAGAATGAAGTGGAGGAGGCTGTGCAGGAGTGTAGAAATGCAGAGGAAAAGGCCAAGAAGGCCATTACTGATGCTGCCATGATGGCAGAAgagctgaagaaggagcaggacactagtGCTCACCTGGAGCGCATGAAAAAGAACATGGAGCAGACCATCAAGGACCTGCAGCACCGCCTGGATGAAGCTGAACAAATCGCCATGAAGGGTGGCAAGAAGCAGATCCAGAAGCTGGAGGCCAGAGTGAGAGAGCTAGAGACTGAAGTGGAACTGGAGCAAAGGAGGAGCAGTGATTCTGTGAAAGGAGTCCGTAAATATGAGAGACGCATCAAGGAGCTCACATACCAGACTGAGGAAGACCGTAAGAATTTGAGCCGCCTGCAGGACCTGGTGGACAAACTGCAGCTGAAGGTCAAATCCTACAAGAGAACTTCAGAAGAGGCTGAGGAACAAGCCAATTCCAATTTGGGCAAGTTCCGTAAGATTCAGCATGAACTGGATGAGGCAGAAGAGAGGGCTGATATTGCTGAGTCTCAGGTCAATAAGATGAGAGCCAAGAGTCGTGATGCCGGCTCCAAGAAAGGAAAGGATGAGGAGTGA

Function

NR:

description
myosin-7-like

GO:

id name namespace
GO:0031444 slow-twitch skeletal muscle fiber contraction biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562693.2 True 5814 mRNA 0.49 37 21107774 21130305

Neighbor

gene id symbol gene type direction distance location
LOC110490945 LOC106589989 coding upstream 15339 21084390 ~ 21092435 (+)
LOC110489782 LOC106590268 coding upstream 33674 21055658 ~ 21074100 (+)
LOC100136149 LOC100136486 coding upstream 61210 21030657 ~ 21046564 (+)
slc22a17 slc22a17 coding upstream 124324 20971804 ~ 20983450 (+)
cebp1 LOC106590243 coding upstream 147691 20958415 ~ 20960083 (+)
LOC110489784 LOC106590267 coding downstream 15212 21145517 ~ 21161815 (+)
LOC110489799 NA coding downstream 517832 21648137 ~ 21649966 (+)
aoc1 LOC106590278 coding downstream 577431 21707736 ~ 21713134 (+)
slc12a7b LOC106590280 coding downstream 599450 21729755 ~ 21794253 (+)
si:ch211-276f18.2 gfod1 coding downstream 673847 21804152 ~ 21844069 (+)
G1267986 NA non-coding upstream 137839 20969282 ~ 20969935 (+)
G1267965 NA non-coding upstream 203255 20904265 ~ 20904519 (+)
G1267962 NA non-coding upstream 205067 20902493 ~ 20902707 (+)
LOC110490942 NA non-coding upstream 303012 20801241 ~ 20804982 (+)
G1268075 NA non-coding downstream 41657 21171962 ~ 21172222 (+)
G1268081 NA non-coding downstream 124956 21255261 ~ 21257850 (+)
G1268151 NA non-coding downstream 157326 21287631 ~ 21289238 (+)
G1268178 NA non-coding downstream 200771 21331076 ~ 21331425 (+)
G1268212 NA non-coding downstream 244581 21374886 ~ 21376176 (+)
G1267949 pck2 other upstream 266376 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 1427669 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 2245263 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 5213610 15885437 ~ 15895996 (+)
G1261980 NA other upstream 5371357 15735930 ~ 15736417 (+)
LOC110489812 rdh12 other downstream 2002554 23132828 ~ 23146739 (+)
G1270643 NA other downstream 2247003 23377308 ~ 23377560 (+)
G1270652 NA other downstream 2276355 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 2315533 23445838 ~ 23451494 (+)

Expression


Co-expression Network