Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489799 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 21648137 ~ 21649966 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tripartite motif-containing protein 35-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021562718.2 | True | 1830 | mRNA | 0.45 | 1 | 21648137 | 21649966 |
21,645,200
21,645,600
21,646,000
21,646,400
21,646,800
21,647,200
21,647,600
21,648,000
21,648,400
21,648,800
21,648,800
21,649,200
21,649,600
21,650,000
21,650,400
21,650,800
21,651,200
21,651,600
21,652,000
21,652,400
NC_048579.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489784 | LOC106590267 | coding | upstream | 486322 | 21145517 ~ 21161815 (+) |
| LOC110489785 | LOC106590267 | coding | upstream | 517832 | 21107774 ~ 21130305 (+) |
| LOC110490945 | LOC106589989 | coding | upstream | 555702 | 21084390 ~ 21092435 (+) |
| LOC110489782 | LOC106590268 | coding | upstream | 574037 | 21055658 ~ 21074100 (+) |
| LOC100136149 | LOC100136486 | coding | upstream | 601573 | 21030657 ~ 21046564 (+) |
| aoc1 | LOC106590278 | coding | downstream | 57770 | 21707736 ~ 21713134 (+) |
| slc12a7b | LOC106590280 | coding | downstream | 79789 | 21729755 ~ 21794253 (+) |
| si:ch211-276f18.2 | gfod1 | coding | downstream | 154186 | 21804152 ~ 21844069 (+) |
| LOC110489791 | LOC106590282 | coding | downstream | 259666 | 21909632 ~ 21991990 (+) |
| LOC110489805 | LOC106590283 | coding | downstream | 346852 | 21996818 ~ 22054060 (+) |
| G1268375 | NA | non-coding | upstream | 42730 | 21605100 ~ 21605407 (+) |
| G1268371 | NA | non-coding | upstream | 45816 | 21601108 ~ 21602321 (+) |
| G1268352 | NA | non-coding | upstream | 72262 | 21575670 ~ 21575875 (+) |
| G1268338 | NA | non-coding | upstream | 97994 | 21549845 ~ 21550143 (+) |
| G1268212 | NA | non-coding | upstream | 271961 | 21374886 ~ 21376176 (+) |
| G1269040 | NA | non-coding | downstream | 7408 | 21657374 ~ 21658124 (+) |
| G1269086 | NA | non-coding | downstream | 77254 | 21727220 ~ 21727523 (+) |
| G1269113 | NA | non-coding | downstream | 147554 | 21797520 ~ 21797808 (+) |
| G1269116 | NA | non-coding | downstream | 149587 | 21799553 ~ 21799778 (+) |
| G1267949 | pck2 | other | upstream | 806739 | 20840295 ~ 20841398 (+) |
| epb41l3a | LOC106590342 | other | upstream | 1968032 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 2785626 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 5753973 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 5911720 | 15735930 ~ 15736417 (+) |
| LOC110489812 | rdh12 | other | downstream | 1482893 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 1727342 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 1756694 | 23406660 ~ 23408002 (+) |
| G1270669 | psme2 | other | downstream | 1795872 | 23445838 ~ 23451494 (+) |
