LOC118938910


Basic Information

Item Value
gene id LOC118938910
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 22795564 ~ 22796979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036304.1
aggagtagttggacaactgggagaggagtagctggaccaggcagagtagttggaccaggacaagggagaaggagaggtagggggagaggagtaAGAATGTGTGTTGGTGTTCAAAGGAGAGTAAGAGCTGTTGTCACTGATGACATAAGAGCCACCATCATAGACCATGTGATaaaccatggtctatcactgagagaggctggtgaaagagtccaTCCTAATCTCAGACAGTCAATCGTGGCTTCCATTGTCCAGAATTTTCAACAAACCAACAGGACGTCATCCACCCCTCTGGGGGAAGAGGAAAGCTCCTCAGTGAAGACCTAGAGCATGCCATTGTAGGATTGGTCATTGCTGACAATGCAATAACACAGAGAAATTCAGAGCAGAATTGTAGAGGACAACCTGGTATTTCACAATGTGGAAAGCATCAGCCTGACTACCAATGCTCTGACCAAACACAGAGTTTGAATGAAACAGTTGCACACAGCTCCTTTTGAAAGGAACAGTGAGCGGGTCAAGGAGCTCCGGCACCAATACGTCCAGAATGTCATGGAGTTGGAGGCTAATCAGACCCCACATGAAATCATTAAGTAGACGAGTCAGGGTTTAACCTGGCAAAAACACATCGGCGTGGAAGAAACGTCATCGGGAAAAAGGCCACTGTAGATGTGCCGGGTCAGAGAGGAGCAAATATCACAATGTGTGCTGCAATCTGGAGTGCTGGTTTGGTCCTGCAGAAATGCCAGATTGGTCCCTACAACACTGAGCTCCCTCCTGGATGCCATGGATGCCGGCTGCAGAGACATCTcagctgaagactgccaggggtgGATAAGGCAGGCCAAGCGTTTCTATCCAAGGTGCAGAGACATCTcagctgaagactgccaggggtgGATGAGGCAGGCCAAGCGTTTCTATCCAAGGTGCAAAGCGAGAGACGACATAGGATGTGATGTGGACGAGAACATGTGGTCAAATGCTGAAGATCGTATAGATTAGAACAGGACTGGGCATTTTTGTGTTTTTTCCCTTCTGTGTCTTTTTTACTGTAATTGTGTTTTATTGTTACACATTAGGTAAAAACGGCCATGTATGTTGGTTTTTTTGTTGATCACTGGCAGCAATTTCATGTTACTAATAAAGATTTTACTGCAGCAA

Function

NR:

description
uncharacterized protein LOC106674661

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036304.1 True 1164 mRNA 0.47 3 22795564 22796979

Neighbor

gene id symbol gene type direction distance location
LOC110489807 LOC106590288 coding downstream 119178 22644341 ~ 22676386 (-)
LOC110489790 LOC106590241 coding downstream 348869 22367531 ~ 22446695 (-)
LOC110489802 LOC106590287 coding downstream 436058 22312796 ~ 22359506 (-)
LOC110489804 LOC106590285 coding downstream 484293 22215471 ~ 22311271 (-)
LOC110489796 LOC106590244 coding downstream 931451 21853700 ~ 21864113 (-)
LOC110490829 LOC106590245 coding upstream 101133 22898112 ~ 22899241 (-)
si:dkey-225n22.4 LOC106590290 coding upstream 110937 22907916 ~ 22955764 (-)
LOC110489811 LOC106590294 coding upstream 263705 23060684 ~ 23122826 (-)
LOC110489813 LOC106590295 coding upstream 349890 23146869 ~ 23156952 (-)
pks1 LOC106590299 coding upstream 415138 23212117 ~ 23221568 (-)
G1270184 NA non-coding downstream 209977 22585343 ~ 22585587 (-)
G1270181 NA non-coding downstream 211729 22583528 ~ 22583835 (-)
G1270139 NA non-coding downstream 244332 22550994 ~ 22551232 (-)
G1270119 NA non-coding downstream 250093 22545265 ~ 22545471 (-)
G1270105 NA non-coding downstream 257351 22537977 ~ 22538213 (-)
G1271047 NA non-coding upstream 4336 22801315 ~ 22805575 (-)
G1271074 NA non-coding upstream 36226 22833205 ~ 22834370 (-)
G1271082 NA non-coding upstream 43507 22840486 ~ 22840912 (-)
G1271085 NA non-coding upstream 46619 22843598 ~ 22843829 (-)
G1271201 NA non-coding upstream 226326 23023305 ~ 23026796 (-)
G1269265 NA other downstream 992212 21802687 ~ 21803352 (-)
G1268555 LOC106590243 other downstream 1835475 20958372 ~ 20960089 (-)
G1267452 NA other downstream 2504891 20290350 ~ 20290673 (-)
G1267414 NA other downstream 2527076 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 3341794 19435018 ~ 19453770 (-)
G1271421 NA other upstream 916376 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 3249269 26046058 ~ 26048599 (-)
G1275015 NA other upstream 3714546 26511525 ~ 26512075 (-)
G1275016 LOC106590191 other upstream 3757989 26554968 ~ 26562033 (-)
LOC110489888 gli3 other upstream 3773299 26566351 ~ 26694581 (-)

Expression


Co-expression Network