acbd5a (acbd5)


Basic Information

Item Value
gene id acbd5a
gene name acbd5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 23253886 ~ 23275145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944080.1
ATTTCTCTCCATTTTAGCAGtagaaaactacaactcccttagCATACAGTGCCTGTCATTACTGTATTGTGCATGGCTTCTGTTGGTAAGAATAAAAAGAGGTCGCCAAGCAAGTCTCAAACAGGTTTGAAGAGTTCGCTATCGTAATTCACACTTCGGTTCATGATGGAGATGGAGGATGGCAGACCTTTGTACGAGCTGAGGTTTGACGCCGCTGTCAAAGTGATACAAAGCTTGCCTCCAGACGGTTCCTTTCAGCCCTCTAATGACATGATGCTCAAGTTTTACAGTTACTACAAACAAGCCACACTTGGACCCTGCAACATACCCAGACCTGGCTTTTGGGATCCGGTGGGAAAAGTGAAATGGGATGCATGGAGTGATCTGGGAGATATGCCCAAGGAAGAGGCTATGACCGCTTACGTTGATGAAATGAAGCTGATCCTTGAGGGCATGCCCTGTACAGATGAGGTAGAGCAGCTTCTAAAGGTGCTGGGCCCATTCTACGAACAGGTGGAAGAGAAAAAGCAGATACATCAGGTGTCAGACCTGTCCGCAGGTTTTGGAACCATGCTAACATCAGCACCTTCAAAAAGTGTCACAAAGAGCCTAATTAGGACAATGGAAATGAATGGCACTTTGGAGACacggcaacccagacaggatgttgAACCTCCGAAGCCCAATGTCATGGCACTGAAGGaacagggggaggaagaggagtttGAGTTTGATGAGGAAGATGAGATGGAGGATAGAAAGTTAGAAATGGTTGAGATAAAAGAGGTGAAAAAAGCCTCAGCCCCACAGCCGAAGAAAAATGGCTCATCCAGGAGACATAAAGTACCCCTGTCCAATGGTAATGTGTGGAATGGAGTGGGCCACCTCCCCAATGGGACCCATACCTCCAAGGCTGCCCTGAACagtgaggactcagaggagggCCTCACCAACAGCACCCTGCCCTTGGAGCCCCATGTCCAAGTCAACGGCCACCACGCAGATCTCGATGTGGATGTATTCAGGCCCTATCGCGCGGCCAGTGACTCAGACAGCGAGGTCTACTGCGACTCCATGGACCAGTTTGGCCTGGAAGAGGGCTCTGAGGCACAAACTGACCGCTGTCTGGAGCTGGATGAGGAGCATGGGGAAAAGGGGGAGAGTAGTGGAGGGGCCAGTGTGGCGGGCATCCAGTGTGGCGCGGAGGATGGGGAGACTTGTGGAGGGGCCTCTCAGAGACAAAGACTGAATGCAGGCAGGCCCAATAGCTCCCTGGTCAGGAGAGAACgagGTTCTAGGTCTTCAGGGCACAGTCCAGGTGCCCAGAAGCCCTTGCAGGGTAGCGGGGGGGACGGGGAGCGGTGGGGGGGCGCGGGGACACCAGGAGGCAGTCTGAATGAGCAGATTGTAGTGGCGCTGGCCAGACTGCAGGAAGACATGCAACGTGTCCTGGAGAGACTGCACACACTGGAGGCCCTCACTGCATCCCAGGCAAGGTCATCGGCTCAACCATACCCACCATCACCCCTGGCAAAGAATAGTAAGAAACCATCCTGGTGGCCTTTCGACGTGTCTCCCAGCACTGTAGCCTTTGCTGTTGTGTGGCCATTTTTGGTGCAGTGGCTTATCCGCCAATATCTTCAACGTAGGAGAAGACGAATCAATTGAAAAATCTCCCAGCCCAAATACACAAAGTGACGAGGAGAAGATTCTCAGCAGTCTGGTTTGTTCCGTCACCTCCCTTATGCTTTCCCCCACACCTCTGTAACTCTAGCTTTTGCGCTATGAAGATTGCACTCGGAGTAGTGAGTGGTGGAAGCCTCGCAAGCCACTAGCACTAGAATTGAAATCAAAGAGAAATGTGAATGTATTGAACCACAGCTTGTAATCGTGCAAGCTTTTTTTGAGATGATAGGCTACAATTACTTTACTACATTAGTAATTATTTTGCTCTCAAGAAATTACTAGGATTTAACTTGGGAGGGGAAAGTTGTTTGTGTATTTTGATTATGGCATTGTTCGTTGATAGATCACAGTAGTTTATTTTATTGCAAGTATGCCGAACATCTTATGGGCATTATAAGAACTATCTTATCTAACTTGTCCTGCAAATGCCTGCCATGGACATAATGCAATATATCATAATAGTTTCTTAGGCAATGCTGCTAATATATCGTGATAACTGTTGGTAGATAATGATGTATTCTTTGAAAGGTACATTTAAttctgaaaatgtattatttctaATAACATGAAATGAAAATTAAGGCTTTGTCTTTGGTTAACCAGGTTGTTGTACATTAAGTTAGGTTGTACATGACTTCTAAATGTTTTCTCTAGGATGTGAATGGTTCATATTTTGTAAACTACTTCATATCTGATAATGTTTTTATACACATAGCTTGTGTATTTTCTGAATTTCATCAACCCATGATAAAGTGCCTCGCCAATGTAAGTTATGCTATGGTTCGGGGGTATTGTAGTTATGTTCACTTTCAAGTTAAACATCTCAACATTGGACCAAATTCTTTCAAAAAATATGAGAACCAGCTGGATGAGAAATGCTCATTggacacaaaaaaaaatgtaggcCGATCCATCCCACACCTTGTTTACGGCAGTGAAAAGCTGTATAATGAGGATTTTCAAATTCAAACCGAACATACAGTGCTTTCTTCTCTAAGGCAGTGTTTTTTAAACtcgtcaactaatcatcaagcgctcaatgagttgaatcaggtgagtttgtGCGGGGCTAAAACCCAAAACAACGTGTGCTGTTGAAGGTACTCGAGGACatgggaaacactgctctaaaCTGTATGGTTTCGAACCAATCATAAGATTTGTCTTTCTCACTTTCTTTAAAGGGCCAATGCGGTGTTTTTTCCTCAATATAAAGTCAATTATGgataattaagtaccttactgtgattattttttttaaaccattttaaattGAAAACAATAGCATAAATTGCTTAAGCAAGAATTTTCCTAGGGCTGTCTGGGGAAACTGAACatttgctgttattggcagagaggtttggaactttcttattggtctagTAACTAATTTAGCACCAGGTGACGTTCACGCAGGCCAAAACCCCAGCCCACCAAAACAGTCTgtaatttcaggtggtcttttcaaacagctcttacactgaaAGGGCATtataattttcacagtattattccaacttcagtgtggaaatataaaacacaggaaaatcacttTTTATGTTTTTACTGTCCTTTTAATAGCAATAATCTTTGTTTTAATGTAGCAAAGTATATTGTGATGTGTAAATTTGGTCATGTATGGCATCTGTTTCAAATCtgttagatttttaaaaaaaaacattgaattagTTCATGTAGTATACATTGTTTAAAAATAGCTGTACAGTCCAGATTAATGCAATATTTTAATTGCATTCAAATGTACTACATAAGATTTACATTGGCAGTAGAGCTGATGCTCTTTTCAGAGCCATTGATTTGTTAAATACATTTTCTACTAAATCTAAAGCGCTCACATTTTCTGCCTTAGGGGTAGATGGTTGTTTGCATGTGATCTGTCATCCAAGGCACGAAAAGTTAATAAAGCATTTTGATCTGTT
>XM_021562751.2
TTATTTATCCACCATCTCCGATATTTCTCTCCATTTTAGCAGtagaaaactacaactcccttagCATACAGTGCCTGTCATTACTGTATTGTGCATGGCTTCTGTTGGTAAGAATAAAAAGAGGTCGCCAAGCAAGTCTCAAACAGGTAGATAATTAAATGGTTTGAAGAGTTCGCTATCGTAATTCACACTTCGGTTCATGATGGAGATGGAGGATGGCAGACCTTTGTACGAGCTGAGGTTTGACGCCGCTGTCAAAGTGATACAAAGCTTGCCTCCAGACGGTTCCTTTCAGCCCTCTAATGACATGATGCTCAAGTTTTACAGTTACTACAAACAAGCCACACTTGGACCCTGCAACATACCCAGACCTGGCTTTTGGGATCCGGTGGGAAAAGTGAAATGGGATGCATGGAGTGATCTGGGAGATATGCCCAAGGAAGAGGCTATGACCGCTTACGTTGATGAAATGAAGCTGATCCTTGAGGGCATGCCCTGTACAGATGAGGTAGAGCAGCTTCTAAAGGTGCTGGGCCCATTCTACGAACAGGTGGAAGAGAAAAAGCAGATACATCAGGTGTCAGACCTGTCCGCAGGTTTTGGAACCATGCTAACATCAGCACCTTCAAAAAGTGTCACAAAGAGCCTAATTAGGACAATGGAAATGAATGGCACTTTGGAGACacggcaacccagacaggatgttgAACCTCCGAAGCCCAATGTCATGGCACTGAAGGaacagggggaggaagaggagtttGAGTTTGATGAGGAAGATGAGATGGAGGATAGAAAGTTAGAAATGGTTGAGATAAAAGAGGTGAAAAAAGCCTCAGCCCCACAGCCGAAGAAAAATGGCTCATCCAGGAGACATAAAGTACCCCTGTCCAATGGTAATGTGTGGAATGGAGTGGGCCACCTCCCCAATGGGACCCATACCTCCAAGGCTGCCCTGAACagtgaggactcagaggagggCCTCACCAACAGCACCCTGCCCTTGGAGCCCCATGTCCAAGTCAACGGCCACCACGCAGATCTCGATGTGGATGTATTCAGGCCCTATCGCGCGGCCAGTGACTCAGACAGCGAGGTCTACTGCGACTCCATGGACCAGTTTGGCCTGGAAGAGGGCTCTGAGGCACAAACTGACCGCTGTCTGGAGCTGGATGAGGAGCATGGGGAAAAGGGGGAGAGTAGTGGAGGGGCCAGTGTGGCGGGCATCCAGTGTGGCGCGGAGGATGGGGAGACTTGTGGAGGGGCCTCTCAGAGACAAAGACTGAATGCAGGCAGGCCCAATAGCTCCCTGGTCAGGAGAGAACgagGTTCTAGGTCTTCAGGGCACAGTCCAGGTGCCCAGAAGCCCTTGCAGGGTAGCGGGGGGGACGGGGAGCGGTGGGGGGGCGCGGGGACACCAGGAGGCAGTCTGAATGAGCAGATTGTAGTGGCGCTGGCCAGACTGCAGGAAGACATGCAACGTGTCCTGGAGAGACTGCACACACTGGAGGCCCTCACTGCATCCCAGGCAAGGTCATCGGCTCAACCATACCCACCATCACCCCTGGCAAAGAATAGTAAGAAACCATCCTGGTGGCCTTTCGACGTGTCTCCCAGCACTGTAGCCTTTGCTGTTGTGTGGCCATTTTTGGTGCAGTGGCTTATCCGCCAATATCTTCAACGTAGGAGAAGACGAATCAATTGAAAAATCTCCCAGCCCAAATACACAAAGTGACGAGGAGAAGATTCTCAGCAGTCTGGTTTGTTCCGTCACCTCCCTTATGCTTTCCCCCACACCTCTGTAACTCTAGCTTTTGCGCTATGAAGATTGCACTCGGAGTAGTGAGTGGTGGAAGCCTCGCAAGCCACTAGCACTAGAATTGAAATCAAAGAGAAATGTGAATGTATTGAACCACAGCTTGTAATCGTGCAAGCTTTTTTTGAGATGATAGGCTACAATTACTTTACTACATTAGTAATTATTTTGCTCTCAAGAAATTACTAGGATTTAACTTGGGAGGGGAAAGTTGTTTGTGTATTTTGATTATGGCATTGTTCGTTGATAGATCACAGTAGTTTATTTTATTGCAAGTATGCCGAACATCTTATGGGCATTATAAGAACTATCTTATCTAACTTGTCCTGCAAATGCCTGCCATGGACATAATGCAATATATCATAATAGTTTCTTAGGCAATGCTGCTAATATATCGTGATAACTGTTGGTAGATAATGATGTATTCTTTGAAAGGTACATTTAAttctgaaaatgtattatttctaATAACATGAAATGAAAATTAAGGCTTTGTCTTTGGTTAACCAGGTTGTTGTACATTAAGTTAGGTTGTACATGACTTCTAAATGTTTTCTCTAGGATGTGAATGGTTCATATTTTGTAAACTACTTCATATCTGATAATGTTTTTATACACATAGCTTGTGTATTTTCTGAATTTCATCAACCCATGATAAAGTGCCTCGCCAATGTAAGTTATGCTATGGTTCGGGGGTATTGTAGTTATGTTCACTTTCAAGTTAAACATCTCAACATTGGACCAAATTCTTTCAAAAAATATGAGAACCAGCTGGATGAGAAATGCTCATTggacacaaaaaaaaatgtaggcCGATCCATCCCACACCTTGTTTACGGCAGTGAAAAGCTGTATAATGAGGATTTTCAAATTCAAACCGAACATACAGTGCTTTCTTCTCTAAGGCAGTGTTTTTTAAACtcgtcaactaatcatcaagcgctcaatgagttgaatcaggtgagtttgtGCGGGGCTAAAACCCAAAACAACGTGTGCTGTTGAAGGTACTCGAGGACatgggaaacactgctctaaaCTGTATGGTTTCGAACCAATCATAAGATTTGTCTTTCTCACTTTCTTTAAAGGGCCAATGCGGTGTTTTTTCCTCAATATAAAGTCAATTATGgataattaagtaccttactgtgattattttttttaaaccattttaaattGAAAACAATAGCATAAATTGCTTAAGCAAGAATTTTCCTAGGGCTGTCTGGGGAAACTGAACatttgctgttattggcagagaggtttggaactttcttattggtctagTAACTAATTTAGCACCAGGTGACGTTCACGCAGGCCAAAACCCCAGCCCACCAAAACAGTCTgtaatttcaggtggtcttttcaaacagctcttacactgaaAGGGCATtataattttcacagtattattccaacttcagtgtggaaatataaaacacaggaaaatcacttTTTATGTTTTTACTGTCCTTTTAATAGCAATAATCTTTGTTTTAATGTAGCAAAGTATATTGTGATGTGTAAATTTGGTCATGTATGGCATCTGTTTCAAATCtgttagatttttaaaaaaaaacattgaattagTTCATGTAGTATACATTGTTTAAAAATAGCTGTACAGTCCAGATTAATGCAATATTTTAATTGCATTCAAATGTACTACATAAGATTTACATTGGCAGTAGAGCTGATGCTCTTTTCAGAGCCATTGATTTGTTAAATACATTTTCTACTAAATCTAAAGCGCTCACATTTTCTGCCTTAGGGGTAGATGGTTGTTTGCATGTGATCTGTCATCCAAGGCACGAAAAGTTAATAAAGCATTTTGATCTGTT

Function

symbol description
acbd5 Predicted to enable fatty-acyl-CoA binding activity and lipid binding activity. Involved in autophagy of peroxisome. Located in nucleoplasm and peroxisome. Implicated in retinal dystrophy with leukodystrophy.

NR:

description
acyl-CoA-binding domain-containing protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944080.1 False 3626 mRNA 0.43 13 23253886 23275123
XM_021562751.2 True 3663 mRNA 0.43 13 23253886 23275145

Neighbor

gene id symbol gene type direction distance location
LOC110489819 LOC106590300 coding downstream 11572 23221692 ~ 23242314 (-)
pks1 LOC106590299 coding downstream 32318 23212117 ~ 23221568 (-)
LOC110489813 LOC106590295 coding downstream 96934 23146869 ~ 23156952 (-)
LOC110489811 LOC106590294 coding downstream 131060 23060684 ~ 23122826 (-)
si:dkey-225n22.4 LOC106590290 coding downstream 298122 22907916 ~ 22955764 (-)
LOC118938792 NA coding upstream 60327 23335472 ~ 23337723 (-)
LOC110489827 NA coding upstream 62737 23337882 ~ 23339790 (-)
LOC110489826 LOC106590306 coding upstream 67848 23342993 ~ 23350387 (-)
LOC110489829 LOC106590307 coding upstream 96022 23371167 ~ 23378986 (-)
LOC110489830 LOC106590309 coding upstream 104634 23379779 ~ 23385850 (-)
G1271299 NA non-coding downstream 49098 23204587 ~ 23204788 (-)
G1271297 LOC106590247 non-coding downstream 50522 23196452 ~ 23203364 (-)
G1271287 NA non-coding downstream 75695 23177992 ~ 23178191 (-)
G1271285 NA non-coding downstream 77787 23175870 ~ 23176099 (-)
G1271201 NA non-coding downstream 227090 23023305 ~ 23026796 (-)
G1271370 NA non-coding upstream 95303 23370448 ~ 23370759 (-)
G1271376 NA non-coding upstream 129742 23404887 ~ 23407463 (-)
G1271556 NA non-coding upstream 461684 23736829 ~ 23737030 (-)
G1271557 NA non-coding upstream 462215 23737360 ~ 23737699 (-)
G1271559 NA non-coding upstream 463760 23738905 ~ 23739115 (-)
G1269265 NA other downstream 1450534 21802687 ~ 21803352 (-)
G1268555 LOC106590243 other downstream 2293797 20958372 ~ 20960089 (-)
G1267452 NA other downstream 2963213 20290350 ~ 20290673 (-)
G1267414 NA other downstream 2985398 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 3800116 19435018 ~ 19453770 (-)
G1271421 NA other upstream 438210 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 2771103 26046058 ~ 26048599 (-)
G1275015 NA other upstream 3236380 26511525 ~ 26512075 (-)
G1275016 LOC106590191 other upstream 3279823 26554968 ~ 26562033 (-)
LOC110489888 gli3 other upstream 3295133 26566351 ~ 26694581 (-)

Expression


Co-expression Network