Item | Value |
---|---|
gene id | prex2 |
gene name | prex2 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 23458108 ~ 23658840 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
prex2 | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within intracellular signal transduction. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in Klatskin's tumor. Orthologous to human PREX2 (phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2). |
description |
---|
phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein |
id | description |
---|---|
K17588 | PREX2; phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036944101.1 | False | 7226 | mRNA | 0.49 | 41 | 23458108 | 23658840 |
XM_036944100.1 | True | 7228 | mRNA | 0.49 | 41 | 23458109 | 23658840 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110489836 | lsm5 | coding | upstream | 12521 | 23439842 ~ 23445587 (+) |
LOC110510445 | LOC106590311 | coding | upstream | 59057 | 23387536 ~ 23399121 (+) |
LOC110489828 | LOC106590304 | coding | upstream | 89296 | 23350408 ~ 23368812 (+) |
LOC110489823 | LOC106590302 | coding | upstream | 116013 | 23275513 ~ 23342095 (+) |
mastl | LOC106590301 | coding | upstream | 204322 | 23248095 ~ 23253786 (+) |
LOC110489839 | LOC106590236 | coding | downstream | 7829 | 23666471 ~ 23836438 (+) |
gig2e | NA | coding | downstream | 39340 | 23698180 ~ 23730175 (+) |
LOC118938911 | NA | coding | downstream | 198573 | 23857413 ~ 23904392 (+) |
sulf1 | sulf1 | coding | downstream | 291592 | 23950432 ~ 24027801 (+) |
si:ch211-37e10.2 | LOC106590232 | coding | downstream | 527626 | 24186466 ~ 24192913 (+) |
G1270669 | psme2 | non-coding | upstream | 6614 | 23445838 ~ 23451494 (+) |
G1270651 | NA | non-coding | upstream | 52794 | 23403079 ~ 23405314 (+) |
G1270647 | LOC106590309 | non-coding | upstream | 73046 | 23384754 ~ 23385062 (+) |
G1270844 | NA | non-coding | downstream | 53954 | 23712794 ~ 23716562 (+) |
G1270848 | NA | non-coding | downstream | 62249 | 23721089 ~ 23723367 (+) |
G1270849 | NA | non-coding | downstream | 62448 | 23721288 ~ 23723683 (+) |
G1270885 | NA | non-coding | downstream | 122417 | 23781257 ~ 23804723 (+) |
G1270892 | NA | non-coding | downstream | 145185 | 23804025 ~ 23805261 (+) |
G1270652 | NA | other | upstream | 50106 | 23406660 ~ 23408002 (+) |
G1270643 | NA | other | upstream | 80548 | 23377308 ~ 23377560 (+) |
LOC110489812 | rdh12 | other | upstream | 321387 | 23132828 ~ 23146739 (+) |
slc12a7b | LOC106590280 | other | upstream | 1663855 | 21729755 ~ 21794253 (+) |
G1271852 | LOC106584099 | other | downstream | 587583 | 24246423 ~ 24250283 (+) |
G1272220 | LOC106590226 | other | downstream | 729572 | 24388412 ~ 24403661 (+) |
G1272573 | NA | other | downstream | 1083063 | 24741879 ~ 24787896 (+) |
chchd7 | chch7 | other | downstream | 1101039 | 24759852 ~ 24762965 (+) |