Item | Value |
---|---|
gene id | rbbp8 |
gene name | LOC106590210 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 24875929 ~ 24892329 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
id | name | namespace |
---|---|---|
GO:0007049 | cell cycle | biological_process |
GO:0000724 | double-strand break repair via homologous recombination | biological_process |
GO:0016787 | hydrolase activity | molecular_function |
id | description |
---|---|
K20773 | RBBP8, CTIP; DNA endonuclease RBBP8 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021562815.2 | False | 3564 | mRNA | 0.47 | 17 | 24875929 | 24889803 |
XM_021562816.2 | False | 3612 | mRNA | 0.48 | 18 | 24875929 | 24892251 |
XM_021562814.2 | False | 3539 | mRNA | 0.48 | 17 | 24875929 | 24892258 |
XM_036944129.1 | False | 3460 | mRNA | 0.47 | 17 | 24875929 | 24892260 |
XM_021562817.2 | True | 3563 | mRNA | 0.48 | 17 | 24875929 | 24892329 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
nsmaf | nsmaf | coding | downstream | 17587 | 24841045 ~ 24858342 (-) |
penkb | penk | coding | downstream | 92635 | 24779955 ~ 24783294 (-) |
sdr16c5b | sdr16c5 | coding | downstream | 100276 | 24764976 ~ 24775653 (-) |
plag1 | plag1 | coding | downstream | 116382 | 24751989 ~ 24759547 (-) |
mos | LOC100136724 | coding | downstream | 129805 | 24744616 ~ 24746124 (-) |
LOC100135826 | LOC100135826 | coding | upstream | 67603 | 24959932 ~ 24966285 (-) |
LOC110489868 | ralyl | coding | upstream | 108159 | 25000488 ~ 25157248 (-) |
cdk13 | LOC106590203 | coding | upstream | 718063 | 25610392 ~ 25619873 (-) |
ralaa | LOC106590204 | coding | upstream | 728913 | 25620868 ~ 25646515 (-) |
LOC110489876 | LOC106590200 | coding | upstream | 825443 | 25717772 ~ 25736878 (-) |
G1273015 | NA | non-coding | downstream | 6782 | 24868920 ~ 24869147 (-) |
G1273013 | NA | non-coding | downstream | 8230 | 24867470 ~ 24867699 (-) |
G1273008 | NA | non-coding | downstream | 12472 | 24863137 ~ 24863457 (-) |
G1273006 | NA | non-coding | downstream | 39619 | 24835636 ~ 24836310 (-) |
G1272961 | NA | non-coding | downstream | 106651 | 24769039 ~ 24769278 (-) |
G1273038 | NA | non-coding | upstream | 14668 | 24906997 ~ 24907210 (-) |
G1273043 | NA | non-coding | upstream | 22107 | 24914436 ~ 24915107 (-) |
G1273026 | NA | non-coding | upstream | 75938 | 24968267 ~ 24974780 (-) |
G1273117 | NA | non-coding | upstream | 136058 | 25028387 ~ 25090328 (-) |
G1273167 | NA | non-coding | upstream | 213411 | 25105740 ~ 25106502 (-) |
G1271421 | NA | other | downstream | 1146990 | 23713355 ~ 23728939 (-) |
G1269265 | NA | other | downstream | 3072577 | 21802687 ~ 21803352 (-) |
G1268555 | LOC106590243 | other | downstream | 3915840 | 20958372 ~ 20960089 (-) |
G1267452 | NA | other | downstream | 4585256 | 20290350 ~ 20290673 (-) |
G1267414 | NA | other | downstream | 4607441 | 20267966 ~ 20268488 (-) |
G1274532 | LOC106590196 | other | upstream | 1153919 | 26046058 ~ 26048599 (-) |
G1275015 | NA | other | upstream | 1619196 | 26511525 ~ 26512075 (-) |
G1275016 | LOC106590191 | other | upstream | 1662639 | 26554968 ~ 26562033 (-) |
LOC110489888 | gli3 | other | upstream | 1677949 | 26566351 ~ 26694581 (-) |
LOC110489892 | NA | other | upstream | 1841884 | 26733490 ~ 26743932 (-) |